RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	NSL1	Q96IY1	281 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	PRKD2	Q9BZL6	878 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	ALG13	Q9NP73	1137 aa	Known RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	MIEF1	Q9NQG6	463 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	MAP10	Q9P2G4	905 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	AP3M1	Q9Y2T2	418 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	AIM2	O14862	343 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	HS6ST1	O60243	411 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	CLTB	P09497	229 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	THRA	P10827	490 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	ACO1	P21399	889 aa	Known RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	MAGEA10	P43363	369 aa	Predicted RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	CTCF	P49711	727 aa	Predicted RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	CCNG1	P51959	295 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	MYBPC2	Q14324	1141 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	COL23A1	Q86Y22	540 aa	Predicted RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	KIAA2013	Q8IYS2	634 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	LZTR1	Q8N653	840 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	NBPF15	Q8N660	670 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	RIN3	Q8TB24	985 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	TUBGCP3	Q96CW5	907 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	SERAC1	Q96JX3	654 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	QRFPR	Q96P65	431 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	PPP1R10	Q96QC0	940 aa	Known RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	TARS2	Q9BW92	718 aa	Known RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	ISCU	Q9H1K1	167 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	AGPAT3	Q9NRZ7	376 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	IARS2	Q9NSE4	1012 aa	Known RBP	7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	PCDHGA4	Q9Y5G9	962 aa		7.59	□□□□□ -1.19
PCDH15-231	ENST00000617271	LMTK2	Q8IWU2	1503 aa		7.59	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM220BP	B1ANY3	271 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ITGB6	P18564	788 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	IFNGR2	P38484	337 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	COPA	P53621	1224 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PLOD1	Q02809	727 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	KYNU	Q16719	465 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	DENND1B	Q6P3S1	775 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	LRRC8D	Q7L1W4	858 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	OTOA	Q7RTW8	1153 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CDR2L	Q86X02	465 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GAS2L3	Q86XJ1	694 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TMEM199	Q8N511	208 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	VMP1	Q96GC9	406 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	THUMPD3	Q9BV44	507 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PARVB	Q9HBI1	364 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	NCOA3	Q9Y6Q9	1424 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	USP32	Q8NFA0	1604 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	RAD51B	O15315	384 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	KRT6A	P02538	564 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	KRT6B	P04259	564 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	VEGFA	P15692	232 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	YY1	P25490	414 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CCR1	P32246	355 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	KRT6C	P48668	564 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TUFM	P49411	452 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TBX4	P57082	545 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	BTG3	Q14201	252 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GRIK4	Q16099	956 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ALF	Q53S48	1182 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	SYCP2L	Q5T4T6	812 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	APLF	Q8IW19	511 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TMEM176A	Q96HP8	235 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZSWIM1	Q9BR11	485 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CIPC	Q9C0C6	399 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GJB4	Q9NTQ9	266 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GTF2A1L	Q9UNN4	478 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GNG14	A0A1W2PPG7	69 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	STAU1	O95793	577 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	SREBF1	P36956	1147 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	HPCAL1	P37235	193 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CHRNB3	Q05901	458 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CYP2A13	Q16696	494 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM180A	Q6UWF9	173 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	USP50	Q70EL3	339 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	FBXO16	Q8IX29	292 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TMEM159	Q96B96	161 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PANX3	Q96QZ0	392 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	KCTD10	Q9H3F6	313 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	OSGEPL1	Q9H4B0	414 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ELOVL6	Q9H5J4	265 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	AGO4	Q9HCK5	861 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	AP4E1	Q9UPM8	1137 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PDHX	O00330	501 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ADCY6	O43306	1168 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TGFB3	P10600	412 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	PABPC1	P11940	636 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	HOXB8	P17481	243 aa	Predicted RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	NAA20	P61599	178 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	POLR2L	P62875	67 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	AGMO	Q6ZNB7	445 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ZNF614	Q8N883	585 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	FAM172A	Q8WUF8	416 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	ELOVL4	Q9GZR5	314 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	GEMIN8	Q9NWZ8	242 aa	Known RBP	7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	WHRN	Q9P202	907 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	CNTNAP2	Q9UHC6	1331 aa		7.58	□□□□□ -1.2
PCDH15-231	ENST00000617271	TPBGL	P0DKB5	382 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms