RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 MNX1P50219 401 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 SLC9A4Q6AI14 798 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 JADE1Q6IE81 842 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 DPYSL5Q9BPU6 564 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CBX4O00257 560 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FBXO21O94952 628 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NUDT14O95848 222 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SLC35G4P0C7Q5 338 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GABRR2P28476 465 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FLT3P36888 993 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GALNT18Q6P9A2 607 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TMEM156Q8N614 296 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CLEC1AQ8NC01 280 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 DNAAF2Q9NVR5 837 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.47□□□□□ -1.857e-6■□□□□ 8.5
LPP-220ENST00000617246 EVPLQ92817 2033 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZMYM6O95789 1325 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZNF541Q9H0D2 1346 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 DDX3XO00571 662 aaKnown RBP eCLIP3.47□□□□□ -1.85
LPP-220ENST00000617246 ADH1BP00325 375 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SMSP52788 366 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ACOX1Q15067 660 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 MFSD5Q6N075 450 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FAM129CQ86XR2 697 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CCDC60Q8IWA6 550 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 DTX3Q8N9I9 347 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ADAM2Q99965 735 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 RAB11FIP5Q9BXF6 653 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SMYD2Q9NRG4 433 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 VPS28Q9UK41 221 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 POU2F3Q9UKI9 436 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 EPHX1P07099 455 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NR2C1P13056 603 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CDH3P22223 829 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NLRP11P59045 1033 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 UVSSAQ2YD98 709 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FAM180AQ6UWF9 173 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PALB2Q86YC2 1186 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 EPB41L5Q9HCM4 733 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PDE7BQ9NP56 450 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NKIRAS2Q9NYR9 191 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 KCND3Q9UK17 655 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 STXBP5LQ9Y2K9 1186 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PRDM1O75626 825 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CPP00450 1065 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PEX3P56589 373 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NRG3P56975 720 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 KCNJ2P63252 427 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CNTN1Q12860 1018 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TOB2Q14106 344 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 ZNF658Q5TYW1 1059 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 MPP5Q8N3R9 675 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ECHDC3Q96DC8 303 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 MRRFQ96E11 262 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 S100A13Q99584 98 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TSPY26PQ9H489 355 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZNF576Q9H609 170 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZSCAN32Q9NX65 697 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GULP1Q9UBP9 304 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 H3BMM5 538 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 EPB42P16452 691 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SDSP20132 328 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ITGA9Q13797 1035 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SPDYE7PQ495Y7 208 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TCEAL6Q6IPX3 200 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CMTR2Q8IYT2 770 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 VPS33AQ96AX1 596 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PANX3Q96QZ0 392 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TRIM4Q9C037 500 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 NDST4Q9H3R1 872 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PCDHAC2Q9Y5I4 1007 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 LRRC37AA6NMS7 1700 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 SIPA1L3O60292 1781 aaPredicted RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 CCL16O15467 120 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 PRNPP04156 253 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GJB2P29033 226 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 HSD17B3P37058 310 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 MIIPQ5JXC2 388 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TPRG1Q6ZUI0 275 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 KRT222Q8N1A0 295 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TEX19Q8NA77 164 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZFP28Q8NHY6 868 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FGD4Q96M96 766 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TRMT13Q9NUP7 481 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 UTP11Q9Y3A2 253 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 CHL1O00533 1208 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CD58P19256 250 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 HMOX2P30519 316 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 YWHABP31946 246 aaKnown RBP3.47□□□□□ -1.85
LPP-220ENST00000617246 PEX19P40855 299 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ACLYP53396 1101 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 FNBP1LQ5T0N5 605 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 RAET1GQ6H3X3 334 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 TUBGCP5Q96RT8 1024 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ITGA11Q9UKX5 1188 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 GFRA3O60609 400 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 B3GAT3O94766 335 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 ZNF286BP0CG31 522 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 DIO3P55073 304 aa3.47□□□□□ -1.85
LPP-220ENST00000617246 CERCAMQ5T4B2 595 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms