RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 SERPINF2P08697 491 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 CARNMT1Q8N4J0 409 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 HASPINQ8TF76 798 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 PAFAH2Q99487 392 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 ABHD16BQ9H3Z7 469 aa18.27■□□□□ 0.51
ATXN2-227ENST00000616825 STN1Q9H668 368 aaKnown RBP18.27■□□□□ 0.51
ATXN2-227ENST00000616825 SLCO1B7G3V0H7 640 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 SEL1L3Q68CR1 1132 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 KDM7AQ6ZMT4 941 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 CBX4O00257 560 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 SHMT1P34896 483 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
ATXN2-227ENST00000616825 CHRNB3Q05901 458 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 MGAT5Q09328 741 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 ZPBP2Q6X784 338 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 AGXT2Q9BYV1 514 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 GPAMQ9HCL2 828 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 NT5MQ9NPB1 228 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 MPP6Q9NZW5 540 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 TUBGCP4Q9UGJ1 667 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PLA2G4CQ9UP65 541 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 KANSL1LA0AUZ9 987 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PSMA4P25789 261 aaKnown RBP18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PLIN5Q00G26 463 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PLOD1Q02809 727 aaPredicted RBP18.26■□□□□ 0.51
ATXN2-227ENST00000616825 PGM5Q15124 567 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 CYP4F12Q9HCS2 524 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 DDX43Q9NXZ2 648 aaKnown RBP18.26■□□□□ 0.51
ATXN2-227ENST00000616825 L1RE1Q9UN81 338 aa18.26■□□□□ 0.51
ATXN2-227ENST00000616825 BAZ2BQ9UIF8 2168 aaKnown RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 SPHKAPQ2M3C7 1700 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 SCNN1BP51168 640 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 C11orf63Q6NUN7 778 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 CYP2W1Q8TAV3 490 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 MADDQ8WXG6 1647 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 CPS1P31327 1500 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 CASTOR2A6NHX0 329 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 GLP2RO95838 553 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 VCLP18206 1134 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 MAPK1P28482 360 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 RBM43Q6ZSC3 357 aaKnown RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 MYCBPAPQ8TBZ2 947 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 TATDN2Q93075 761 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 FAM136AQ96C01 138 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 OPTNQ96CV9 577 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 HPS4Q9NQG7 708 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 RAD54BQ9Y620 910 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 CPA3P15088 417 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 TFE3P19532 575 aaPredicted RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 PSMA3P25788 255 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 YWHAZP63104 245 aaKnown RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 REPS2Q8NFH8 660 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 FICDQ9BVA6 458 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 FBXO44Q9H4M3 255 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 PCDH9Q9HC56 1237 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 SCUBE2Q9NQ36 999 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 ZNF711Q9Y462 761 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 PTPRMP28827 1452 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 PLA2G6O60733 806 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 RAP1GAPP47736 663 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 GCNT1Q02742 428 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 ZNF268Q14587 947 aaPredicted RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 VCPIP1Q96JH7 1222 aa18.25■□□□□ 0.51
ATXN2-227ENST00000616825 COPS7BQ9H9Q2 264 aaPredicted RBP18.25■□□□□ 0.51
ATXN2-227ENST00000616825 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 ACKR2O00590 384 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 GRK3P35626 688 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 RAB27AP51159 221 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 RENBPP51606 427 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 FUT8Q9BYC5 575 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 SNTG2Q9NY99 539 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 TSPAN16Q9UKR8 245 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 SHOC2Q9UQ13 582 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 IPPQ9Y573 584 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 UNC13BO14795 1591 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 hCG_2014768A0A024R1R8 64 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 HNRNPCP07910 306 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■□ 22
ATXN2-227ENST00000616825 GRIK4Q16099 956 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 SLC27A1Q6PCB7 646 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 NIPA1Q7RTP0 329 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 SLC44A2Q8IWA5 706 aaPredicted RBP18.24■□□□□ 0.51
ATXN2-227ENST00000616825 VPS50Q96JG6 964 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 RMND5AQ9H871 391 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 CAAP1Q9H8G2 361 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 ACTR8Q9H981 624 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 RGL2O15211 777 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 NDST1P52848 882 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 MRPS35P82673 323 aaKnown RBP18.24■□□□□ 0.51
ATXN2-227ENST00000616825 TTC33Q6PID6 262 aaPredicted RBP18.24■□□□□ 0.51
ATXN2-227ENST00000616825 CHMP1BQ7LBR1 199 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 MCOLN2Q8IZK6 566 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 COLGALT1Q8NBJ5 622 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 PCDHB5Q9Y5E4 795 aa18.24■□□□□ 0.51
ATXN2-227ENST00000616825 SALL1Q9NSC2 1324 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms