RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ITGA7Q13683 1181 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 GIT2Q14161 759 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 PACS1Q6VY07 963 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 BNC2Q6ZN30 1099 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-211ENST00000615798 LHFPL3Q86UP9 236 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 DPF1Q92782 380 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 MYH1P12882 1939 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
COL12A1-211ENST00000615798 CSN2P05814 226 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CSF1RP07333 972 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GYG1P46976 350 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GPS1Q13098 491 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PUS3Q9BZE2 481 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 POLR3BQ9NW08 1133 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 NDUFAF4Q9P032 175 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 DMTF1Q9Y222 760 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GSTK1Q9Y2Q3 226 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 JAK3P52333 1124 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ALDH6A1Q02252 535 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 NR1I3Q14994 352 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ALKBH5Q6P6C2 394 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 MARK2Q7KZI7 788 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 FSTL5Q8N475 847 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TEX47Q8TBZ9 253 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CALN1Q9BXU9 219 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 HPCAL4Q9UM19 191 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 K7ENM7 598 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PLOD3O60568 738 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 NUDT7P0C024 238 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CALB2P22676 271 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 DDX6P26196 483 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 XIAPP98170 497 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CBLBQ13191 982 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ODR4Q5SWX8 454 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TTC30BQ8N4P2 665 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 DAGLBQ8NCG7 672 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TUBGCP5Q96RT8 1024 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TRMT13Q9NUP7 481 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 SNX24Q9Y343 169 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PMPCBO75439 489 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 IRAK1P51617 712 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ALDH3A2P51648 485 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 POLGP54098 1239 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 THAP5Q7Z6K1 395 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 RAB42Q8N4Z0 105 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 MED11Q9P086 117 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ATG7O95352 703 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PCNAP12004 261 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CDH6P55285 790 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 KCNK10P57789 538 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GRAPQ13588 217 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GRAPLQ8TC17 118 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ZNF507Q8TCN5 953 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 S100A13Q99584 98 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 RP1P56715 2156 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 SYNPOQ8N3V7 929 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 RNPC3Q96LT9 517 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 RERGLQ9H628 205 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 FAM25EA8MYX2 175 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 E5RI56 91 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ZNF12P17014 697 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 STIP1P31948 543 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 GSPT2Q8IYD1 628 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 SPATA18Q8TC71 538 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ECSITQ9BQ95 431 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ADI1Q9BV57 179 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 ROGDIQ9GZN7 287 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 LOC100506127A0A0U1RQW1 187 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 HAGHLQ6PII5 290 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PI4KBQ9UBF8 816 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 C3P01024 1663 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 KIF1AQ12756 1690 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 PALMO75781 387 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 SPARCP09486 303 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 FOXO4P98177 505 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 IL5RAQ01344 420 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CYFIP1Q7L576 1253 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 C9orf16Q9BUW7 83 aa9.54□□□□□ -0.88
COL12A1-211ENST00000615798 COPS7BQ9H9Q2 264 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-211ENST00000615798 CYP27B1O15528 508 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 YAP1P46937 504 aaKnown RBP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 RPS7P62081 194 aaKnown RBP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 SLFN13Q68D06 897 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 CENPIQ92674 756 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 FOXN3O00409 490 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-211ENST00000615798 PDXKO00764 312 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 NUDT2P50583 147 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 PWP1Q13610 501 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 TPH2Q8IWU9 490 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 PPM1KQ8N3J5 372 aa9.53□□□□□ -0.88
COL12A1-211ENST00000615798 COA1Q9GZY4 146 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms