RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PRR5-ARHGAP8B1AHC4 643 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 M0QZQ0 153 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 THAP12O43422 761 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 SRGAP2O75044 1071 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 PRLRP16471 622 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 PSMC3P17980 439 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 SDHBP21912 280 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 LRPAP1P30533 357 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 GNA15P30679 374 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 SOX9P48436 509 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 AARSP49588 968 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL4A1-205ENST00000615732 DNA2P51530 1060 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ARHGAP8P85298 464 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 DUSP4Q13115 394 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 NAA30Q147X3 362 aaPredicted RBP11.33□□□□□ -0.6
COL4A1-205ENST00000615732 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 DAAM2Q86T65 1068 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 NT5DC4Q86YG4 428 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 TMC8Q8IU68 726 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ATAD1Q8NBU5 361 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 BEST2Q8NFU1 509 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 TTC8Q8TAM2 541 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 FAM3CQ92520 227 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ANKRD7Q92527 254 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ZNF653Q96CK0 615 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 OSBPL9Q96SU4 736 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 PCDHB18PQ96TA0 734 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 FAM126AQ9BYI3 521 aaPredicted RBP11.33□□□□□ -0.6
COL4A1-205ENST00000615732 THAP2Q9H0W7 228 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ISCUQ9H1K1 167 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
COL4A1-205ENST00000615732 CTTNBP2NLQ9P2B4 639 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 GMEB2Q9UKD1 530 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 UBQLN1Q9UMX0 589 aaKnown RBP11.33□□□□□ -0.6
COL4A1-205ENST00000615732 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 C2CD2Q9Y426 696 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 ACACBO00763 2458 aa11.33□□□□□ -0.6
COL4A1-205ENST00000615732 CITO14578 2027 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 FAM170AA1A519 330 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 MTMR11A4FU01 709 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 CST3P01034 146 aaPredicted RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ITGB3P05106 788 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 CD58P19256 250 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ACO1P21399 889 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ATICP31939 592 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 EPHA5P54756 1037 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 RBP5P82980 135 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 SPEM2Q0P670 501 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 MEI1Q5TIA1 1274 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 CCDC70Q6NSX1 233 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 RSRC2Q7L4I2 434 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 C1orf127Q8N9H9 656 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 OR10T2Q8NGX3 314 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 DEPDC1BQ8WUY9 529 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 IRF7Q92985 503 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ZFYVE19Q96K21 471 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 PSMB7Q99436 277 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 RTKNQ9BST9 563 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 PLEKHA5Q9HAU0 1116 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ACP6Q9NPH0 428 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 NXF1Q9UBU9 619 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 AMFRQ9UKV5 643 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 ITGA11Q9UKX5 1188 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 DERAQ9Y315 318 aa11.32□□□□□ -0.6
COL4A1-205ENST00000615732 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 TPRP12270 2363 aaKnown RBP11.32□□□□□ -0.6
COL4A1-205ENST00000615732 F5P12259 2224 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 ARNTLO00327 626 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 MAN2B1O00754 1011 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 ZNF185O15231 689 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 XPOTO43592 962 aaKnown RBP11.31□□□□□ -0.6
COL4A1-205ENST00000615732 MICAL2O94851 1124 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 OAZ2O95190 189 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 MYBL1P10243 752 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 POLR2BP30876 1174 aaKnown RBP11.31□□□□□ -0.6
COL4A1-205ENST00000615732 HOXC13P31276 330 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 TNNC1P63316 161 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 CYP4F8P98187 520 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 SATB1Q01826 763 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 DMWDQ09019 674 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 GAS6Q14393 721 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 ZBTB6Q15916 424 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 Q6ZS52 159 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 MTERF4Q7Z6M4 381 aaKnown RBP11.31□□□□□ -0.6
COL4A1-205ENST00000615732 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
COL4A1-205ENST00000615732 LEMD2Q8NC56 503 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms