RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CAPN6Q9Y6Q1 641 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 RGPD5Q99666 1765 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ARFGEF2Q9Y6D5 1785 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 A0A0G2JND7 137 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ZWINTO95229 277 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 USP17L7P0C7H9 530 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ESRRAP11474 423 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 YBX3P16989 372 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 CYP2C18P33260 490 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 HADHAP40939 763 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PDCLQ13371 301 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 MRNIPQ6NTE8 343 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 BLOC1S5Q8TDH9 187 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 FGD4Q96M96 766 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 NXF3Q9H4D5 531 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PRDM16Q9HAZ2 1276 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ASAH2Q9NR71 780 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PPARGC1AQ9UBK2 798 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 SIK3Q9Y2K2 1263 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 AOC2O75106 756 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 BAG2O95816 211 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 SYF2O95926 243 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 FGBP02675 491 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 NOS2P35228 1153 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PRKCIP41743 596 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PHEXP78562 749 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 SMARCB1Q12824 385 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 TRADDQ15628 312 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 NFIL3Q16649 462 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 OLFML2BQ68BL8 750 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 CCNI2Q6ZMN8 369 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 C3orf62Q6ZUJ4 267 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 MIPOL1Q8TD10 442 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ACTRT1Q8TDG2 376 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ADGRE3Q9BY15 652 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 SLC7A5P2Q9GIP4 190 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ST6GALNAC4Q9H4F1 302 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 RNF19AQ9NV58 838 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 MARCH2Q9P0N8 246 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 SNED1Q8TER0 1413 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PHF20L1A8MW92 1017 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 B4GALT4O60513 344 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 LUC7L3O95232 432 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TUBP50607 506 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 CCNG2Q16589 344 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TTLL9Q3SXZ7 439 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 UGT3A1Q6NUS8 523 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 CSGALNACT1Q8TDX6 532 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ELMO3Q96BJ8 720 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TMA16Q96EY4 203 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 LACRTQ9GZZ8 138 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 FGFR1OP2Q9NVK5 253 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 COL16A1Q07092 1604 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 CCDC195A0A1B0GUA6 201 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TGFB1I1O43294 461 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 JCHAINP01591 159 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 SNRPAP09012 282 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 MAP2K2P36507 400 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 HIRAP54198 1017 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 LBRQ14739 615 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 HECTD3Q5T447 861 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 MARC1Q5VT66 337 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM47EQ6ZV65 393 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 OR5B17Q8NGF7 314 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 EPS8L1Q8TE68 723 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ATP13A1Q9HD20 1204 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TBC1D13Q9NVG8 400 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 RGPD1P0DJD0 1748 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 OR1E1P30953 314 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 HDAC4P56524 1084 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 SATB1Q01826 763 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 LGI2Q8N0V4 545 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 RIBC1Q8N443 379 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 GBP7Q8N8V2 638 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 WNT8BQ93098 351 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 MYLPFQ96A32 169 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ROPN1BQ9BZX4 212 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ROPN1Q9HAT0 212 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ARHGAP28Q9P2N2 729 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 DUSP10Q9Y6W6 482 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 CRTAMO95727 393 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 MUM1Q2TAK8 710 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ZNF284Q2VY69 593 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 DDX42Q86XP3 938 aaKnown RBP eCLIP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 ELAC2Q9BQ52 826 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 EPC1Q9H2F5 836 aa9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 DRG1Q9Y295 367 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-208ENST00000615606 HSPA9P38646 679 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ARL4DP49703 201 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 HABP4Q5JVS0 413 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 ANGPTL8Q6UXH0 198 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 FAM71AQ8IYT1 594 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 KLHL29Q96CT2 875 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 TTPALQ9BTX7 342 aa9.75□□□□□ -0.85
CLTCL1-208ENST00000615606 NT5MQ9NPB1 228 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms