RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SNX14Q9Y5W7 946 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 RP1P56715 2156 aa7.34□□□□□ -1.23
MUC1-227ENST00000615517 ZFC3H1O60293 1989 aaKnown RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 MED13Q9UHV7 2174 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 ENO4A6NNW6 628 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 KPNA7A9QM74 516 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 GFRA2O00451 464 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CPLX1O14810 134 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 MPOP05164 745 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CISD3P0C7P0 127 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 MBL2P11226 248 aaPredicted RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 ITGB6P18564 788 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 OXTRP30559 389 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
MUC1-227ENST00000615517 COPAP53621 1224 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 STRN3Q13033 797 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 STK3Q13188 491 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 SERINC3Q13530 473 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 TMEM132DQ14C87 1099 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 ANO4Q32M45 955 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 INAVAQ3KP66 663 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CFAP221Q4G0U5 840 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 BTBD8Q5XKL5 378 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 GRAMD4Q6IC98 578 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CLEC18BQ6UXF7 455 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 KDM7AQ6ZMT4 941 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 FAM124AQ86V42 546 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 PDCL2Q8N4E4 241 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 EID2Q8N6I1 236 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 SAP25Q8TEE9 199 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 KCNE4Q8WWG9 221 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 SNX19Q92543 992 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 P2RY11Q96G91 374 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 SPATA17Q96L03 361 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 NUP58Q9BVL2 599 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 TTLL2Q9BWV7 592 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 RPF1Q9H9Y2 349 aaKnown RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 SPHK2Q9NRA0 654 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 STARD5Q9NSY2 213 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 DNAJC17Q9NVM6 304 aaKnown RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 DDX43Q9NXZ2 648 aaKnown RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 TBC1D14Q9P2M4 693 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CPSF3Q9UKF6 684 aaKnown RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 L1RE1Q9UN81 338 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 CLCA2Q9UQC9 943 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.33□□□□□ -1.24
MUC1-227ENST00000615517 PAXBP1Q9Y5B6 917 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 PCDHB6Q9Y5E3 794 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 PCDHB13Q9Y5F0 798 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 STON1Q9Y6Q2 735 aa7.33□□□□□ -1.24
MUC1-227ENST00000615517 SETD2Q9BYW2 2564 aaPredicted RBP7.32□□□□□ -1.24
MUC1-227ENST00000615517 CSMD1Q96PZ7 3565 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 E9PMD0 336 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 OGTO15294 1046 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 CACNG3O60359 315 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ATP2C2O75185 946 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 MUTP22033 750 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 CDC25AP30304 524 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ACSL1P33121 698 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 KRT2P35908 639 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 MAGEA11P43364 429 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ENPP2Q13822 863 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 TEAD4Q15561 434 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 CRYBG3Q68DQ2 2970 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 RINT1Q6NUQ1 792 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 FAM171BQ6P995 826 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 DENND5BQ6ZUT9 1274 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 NUDT18Q6ZVK8 323 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 C1orf186Q6ZWK4 172 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 CACUL1Q86Y37 369 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 TMPRSS6Q8IU80 811 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 SPATA2LQ8IUW3 424 aaPredicted RBP7.32□□□□□ -1.24
MUC1-227ENST00000615517 CD302Q8IX05 232 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 BIRC7Q96CA5 298 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 OTUB2Q96DC9 234 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 SIPA1Q96FS4 1042 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ZNF274Q96GC6 653 aaPredicted RBP7.32□□□□□ -1.24
MUC1-227ENST00000615517 FUBP3Q96I24 572 aaKnown RBP eCLIP7.32□□□□□ -1.24
MUC1-227ENST00000615517 DPH1Q9BZG8 443 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ASCL3Q9NQ33 180 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 DDX19AQ9NUU7 478 aaKnown RBP7.32□□□□□ -1.24
MUC1-227ENST00000615517 DPP3Q9NY33 737 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 MAN2B2Q9Y2E5 1009 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 DERAQ9Y315 318 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 ZFHX3Q15911 3703 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 LRRK1Q38SD2 2015 aa7.32□□□□□ -1.24
MUC1-227ENST00000615517 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 NEDD8-MDP1E9PL57 170 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 GREM1O60565 184 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 TSPAN3O60637 253 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 DXOO77932 396 aaKnown RBP7.31□□□□□ -1.24
MUC1-227ENST00000615517 MT-CO3P00414 261 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 ABL1P00519 1130 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 WNT1P04628 370 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 TYRP14679 529 aa7.31□□□□□ -1.24
MUC1-227ENST00000615517 BDNFP23560 247 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms