RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SERPINF2P08697 491 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PCK1P35558 622 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 MAPK9P45984 424 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC12A3P55017 1021 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 GTF2BQ00403 316 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC6A3Q01959 620 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PRKCZQ05513 592 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 DENND5BQ6ZUT9 1274 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCDC3Q9BQI4 270 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 NIFKQ9BYG3 293 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SUDS3Q9H7L9 328 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 TBC1D3BA6NDS4 549 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 NFKBIEO00221 500 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 MICAL2O94851 1124 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 BCL2L1Q07817 233 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CAPRIN1Q14444 709 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 USP10Q14694 798 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 VSTM1Q6UX27 236 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CORO1BQ9BR76 489 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 RAB6BQ9NRW1 208 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PCDHB9Q9Y5E1 797 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF862O60290 1169 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 NAB1Q13506 487 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 LLGL2Q6P1M3 1020 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCDC60Q8IWA6 550 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 STK40Q8N2I9 435 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CASP10Q92851 521 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 GAD1Q99259 594 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 UBA2Q9UBT2 640 aaPredicted RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 TSPAN16Q9UKR8 245 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 ACSL3O95573 720 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 FXR1P51114 621 aaKnown RBP eCLIP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCR3P51677 355 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 PDCLQ13371 301 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 AGAP9Q5VTM2 703 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRAMD4Q6IC98 578 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CYB5D1Q6P9G0 228 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 FOXR2Q6PJQ5 311 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 LGI2Q8N0V4 545 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 PHC3Q8NDX5 983 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 PANX3Q96QZ0 392 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MYCBPQ99417 103 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ANGPTL2Q9UKU9 493 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARHGAP26Q9UNA1 814 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ASB3Q9Y575 518 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCDC22O60826 627 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MYL2P10916 166 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CTSEP14091 401 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CHRM3P20309 590 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 GLRA2P23416 452 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 LRRC32Q14392 662 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 NTRK3Q16288 839 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAM83EQ2M2I3 478 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 TFDP3Q5H9I0 405 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 DDIASQ8IXT1 998 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARMC2Q8NEN0 867 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 OR8D1Q8WZ84 308 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 SALL3Q9BXA9 1300 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CBX4O00257 560 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 DNM1LO00429 736 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 EIF3HO15372 352 aaKnown RBP eCLIP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC10A3P09131 477 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 HTR1BP28222 390 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 THOP1P52888 689 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MOB2Q70IA6 237 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MTMR9Q96QG7 549 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 SAGE1Q9NXZ1 904 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MORC2Q9Y6X9 1032 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 MGEA5O60502 916 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 DARSP14868 501 aaKnown RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 PTPN2P17706 415 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 RAP1GAPP47736 663 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZNF200P98182 395 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 NUDCD3Q8IVD9 361 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CBWD1Q9BRT8 395 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 DZANK1Q9NVP4 752 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CPSF2Q9P2I0 782 aaKnown RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 PSMC3IPQ9P2W1 217 aaPredicted RBP10.06□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCNDBP1O95273 360 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 LTFP02788 710 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 SESN2P58004 480 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 CNTN1Q12860 1018 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCDC38Q502W7 563 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 LRIG3Q6UXM1 1119 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 CCNYL1Q8N7R7 359 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 INPP4AQ96PE3 977 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 PSMD12O00232 456 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 TIMM44O43615 452 aa10.05□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRAP2O75791 330 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms