RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 DNMT3LQ9UJW3 386 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PTSQ03393 145 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SP140Q13342 867 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SCARF1Q14162 830 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 HIC1Q14526 733 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 EPB41L5Q9HCM4 733 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ALG13Q9NP73 1137 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ATP6V1G1O75348 118 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SFNP31947 248 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 DNASE1L1P49184 302 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GTF2IP78347 998 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OGFRL1Q5TC84 451 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SMYD5Q6GMV2 418 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 DENND5AQ6IQ26 1287 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PHF21BQ96EK2 531 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 VTA1Q9NP79 307 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MYO9BQ13459 2157 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 NR2F1P10589 423 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 NME5P56597 212 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYP51A1Q16850 503 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SMYD1Q8NB12 490 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PIK3C3Q8NEB9 887 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TUBB1Q9H4B7 451 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RETREG1Q9H6L5 497 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CNOT8Q9UFF9 292 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SAGE2PA6NJ88 616 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SH3BGRLO75368 114 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 INMTO95050 263 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NDUFA10O95299 355 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NFKB1P19838 968 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCT8P50990 548 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RAB25P57735 213 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MEA1Q16626 185 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 SHC4Q6S5L8 630 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PLCZ1Q86YW0 608 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ING5Q8WYH8 240 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CCNL2Q96S94 520 aaPredicted RBP11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ATG10Q9H0Y0 220 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NEDD4P46934 1319 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PNPLA6Q8IY17 1366 aa11.15□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CHUKO15111 745 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LRG1P02750 347 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RBP3P10745 1247 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 IKBIPQ70UQ0 350 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TRIM62Q9BVG3 475 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RGS18Q9NS28 235 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 C20orf96Q9NUD7 363 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DDX3XO00571 662 aaKnown RBP eCLIP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HS6ST1O60243 411 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RGS2P41220 211 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BNIP1Q12981 228 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RBM39Q14498 530 aaKnown RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MGAT5BQ3V5L5 792 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CITED2Q99967 270 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HERPUD2Q9BSE4 406 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 BRD9Q9H8M2 597 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ASLP04424 464 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CD1BP29016 333 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RAD23AP54725 363 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 WHRNQ9P202 907 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PCDHB7Q9Y5E2 793 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 WWP2O00308 870 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MAGEB3O15480 346 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CLN5O75503 358 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 EIF4A3P38919 411 aaKnown RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MAGEA6P43360 314 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 COASYQ13057 564 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GPD1LQ8N335 351 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 TP53INP1Q96A56 240 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 RUNDC3BQ96NL0 473 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 HEY2Q9UBP5 337 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 DAGLAQ9Y4D2 1042 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 GNAT1P11488 350 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 NCAPHQ15003 741 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 PTPN20Q4JDL3 420 aa11.14□□□□□ -0.63
CNTNAP3B-211ENST00000612828 EPC2Q52LR7 807 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms