RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ASS1P00966 412 aaKnown RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 GNA15P30679 374 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 POLR2BP30876 1174 aaKnown RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 ERFP50548 548 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 MESDQ14696 234 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 MAP7D1Q3KQU3 841 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 DUPD1Q68J44 220 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 HSPBAP1Q96EW2 488 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 ANKRD62A6NC57 917 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 DUSP11O75319 330 aaKnown RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 GDF6Q6KF10 455 aaPredicted RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 IZUMO2Q6UXV1 221 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 LRRC57Q8N9N7 239 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 PPP2R3CQ969Q6 453 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 C18orf25Q96B23 403 aaPredicted RBP16.62■□□□□ 0.25
RTN1-209ENST00000611068 KIF12Q96FN5 646 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 PITPNM3Q9BZ71 974 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
RTN1-209ENST00000611068 MBLAC1A4D2B0 266 aaPredicted RBP16.61■□□□□ 0.25
RTN1-209ENST00000611068 HAS3O00219 553 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 TMEM253P0C7T8 217 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 MCF2P10911 925 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 YY1P25490 414 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 HDAC4P56524 1084 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 SNX17Q15036 470 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 FAM187BQ17R55 369 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 TREML1Q86YW5 311 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
RTN1-209ENST00000611068 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 XPNPEP3Q9NQH7 507 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 PPEF2O14830 753 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 ZC3H11AO75152 810 aaKnown RBP eCLIP16.61■□□□□ 0.25
RTN1-209ENST00000611068 RARBP10826 455 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 DARSP14868 501 aaKnown RBP16.61■□□□□ 0.25
RTN1-209ENST00000611068 IDO1P14902 403 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 TAC1P20366 129 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 STX2P32856 288 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 RASSF2P50749 326 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 YARSP54577 528 aaKnown RBP16.61■□□□□ 0.25
RTN1-209ENST00000611068 ADAM17P78536 824 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 KCNA10Q16322 511 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 AADACL2Q6P093 401 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 RFFLQ8WZ73 363 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 SMYD3Q9H7B4 428 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 CACNG4Q9UBN1 327 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 HMGXB4Q9UGU5 601 aa16.61■□□□□ 0.25
RTN1-209ENST00000611068 SMIM35A0A1B0GVV1 85 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 B4GALT4O60513 344 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 OPHN1O60890 802 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 IGHA2P01877 340 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ASGR1P07306 291 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 PTPN4P29074 926 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 GPC5P78333 572 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ZNF211Q13398 564 aaPredicted RBP16.6■□□□□ 0.25
RTN1-209ENST00000611068 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 RFX8Q6ZV50 586 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ST13P4Q8IZP2 240 aaPredicted RBP16.6■□□□□ 0.25
RTN1-209ENST00000611068 NME8Q8N427 588 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 GAB3Q8WWW8 586 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ERP44Q9BS26 406 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 TLE6Q9H808 572 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 PCDHB2Q9Y5E7 798 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 NUMBLQ9Y6R0 609 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 RIPK2O43353 540 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ATP9BO43861 1147 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 COL6A2P12110 1019 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 TMEM259Q4ZIN3 620 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 LRRC8BQ6P9F7 803 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ZNF410Q86VK4 478 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 RSPH1Q8WYR4 309 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 C11orf70Q9BRQ4 267 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 CCDC28BQ9BUN5 200 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 NUP85Q9BW27 656 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 STMN4Q9H169 189 aaPredicted RBP16.6■□□□□ 0.25
RTN1-209ENST00000611068 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
RTN1-209ENST00000611068 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
RTN1-209ENST00000611068 FGGP02679 453 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 CD19P15391 556 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 ASPAP45381 313 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 VPS41P49754 854 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 SH3BGRP55822 239 aaPredicted RBP16.59■□□□□ 0.25
RTN1-209ENST00000611068 DR1Q01658 176 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 TAF1BQ53T94 588 aaPredicted RBP16.59■□□□□ 0.25
RTN1-209ENST00000611068 KLHL35Q6PF15 583 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
RTN1-209ENST00000611068 TFAP2BQ92481 460 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 GOLGA2P5Q9HBQ8 144 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
RTN1-209ENST00000611068 RPL26L1Q9UNX3 145 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms