RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.14
NEK3-205ENST00000610828 AP4E1Q9UPM8 1137 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 TRPV2Q9Y5S1 764 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 CLUHO75153 1309 aa14.18□□□□□ -0.14
NEK3-205ENST00000610828 SMAPO00193 183 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 XPO1O14980 1071 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 KPNA6O60684 536 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 ZBED1O96006 694 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 KRT15P19012 456 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 CYP2F1P24903 491 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 RBL1P28749 1068 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 L1CAMP32004 1257 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 PHBP35232 272 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 SCNN1AP37088 669 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 LIG3P49916 1009 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 GJA9P57773 515 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 C6orf89Q6UWU4 347 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 C3orf62Q6ZUJ4 267 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 RSPH3Q86UC2 560 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 TDRPQ86YL5 185 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 NDRG1Q92597 394 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 CENPIQ92674 756 aaPredicted RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 LPPQ93052 612 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 WNT8BQ93098 351 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 FAF2Q96CS3 445 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 GAD1Q99259 594 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 DUSP16Q9BY84 665 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 MAGEB5Q9BZ81 275 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 ARHGAP39Q9C0H5 1083 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 USP29Q9HBJ7 922 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 ACTL7BQ9Y614 415 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 BEST1O76090 585 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 CYBAP13498 195 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 PTPN1P18031 435 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 MAGEA9P43362 315 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 AFF1P51825 1210 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 DPYSL2Q16555 572 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 EFHC1Q5JVL4 640 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 ARCQ7LC44 396 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 YTHDF3Q7Z739 585 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 VSIG1Q86XK7 387 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 PALM2Q8IXS6 379 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 CCDC185Q8N715 623 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 TRIB2Q92519 343 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 WDR83Q9BRX9 315 aaKnown RBP14.17□□□□□ -0.14
NEK3-205ENST00000610828 MED10Q9BTT4 135 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 RASSF4Q9H2L5 321 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 NRDE2Q9H7Z3 1164 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 RAB6BQ9NRW1 208 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
NEK3-205ENST00000610828 E7ESA3 106 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 NPR3P17342 541 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 NR1H3Q13133 447 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 MDH1BQ5I0G3 518 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 MFSD14CQ5VZR4 134 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 ARHGEF18Q6ZSZ5 1173 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 TRABD2AQ86V40 505 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 GSTCDQ8NEC7 633 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 SPC25Q9HBM1 224 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 SLC38A7Q9NVC3 462 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 SAMD15Q9P1V8 674 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 PAK5Q9P286 719 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 CHMP2BQ9UQN3 213 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 PIAS1O75925 651 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 CHRNA1P02708 482 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 THP07101 528 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 IBSPP21815 317 aaPredicted RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 STX2P32856 288 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 MATKP42679 507 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 SULT1E1P49888 294 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 CLCNKBP51801 687 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 GEMIN4P57678 1058 aaKnown RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 SREBF2Q12772 1141 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 EFTUD2Q15029 972 aaKnown RBP eCLIP14.16□□□□□ -0.14
NEK3-205ENST00000610828 PKN2Q16513 984 aaKnown RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 FAM131BQ86XD5 332 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 HACE1Q8IYU2 909 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 DEFB106AQ8N104 65 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 CCDC197Q8NCU1 140 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 SENP8Q96LD8 212 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 PSMC3IPQ9P2W1 217 aaPredicted RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 SLC24A2Q9UI40 661 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 RABGEF1Q9UJ41 708 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 ZMYND8Q9ULU4 1186 aaPredicted RBP14.16□□□□□ -0.14
NEK3-205ENST00000610828 GABRQQ9UN88 632 aa14.16□□□□□ -0.14
NEK3-205ENST00000610828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.15□□□□□ -0.14
NEK3-205ENST00000610828 SYNJ2BP-COX16A0A087WUM0 186 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 CFAP69A5D8W1 941 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 TCP11X1B4DZS4 312 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 SPAG7O75391 227 aa14.15□□□□□ -0.14
NEK3-205ENST00000610828 GBE1Q04446 702 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms