RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 FAM155AB1AL88 458 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 RASA4BC9J798 803 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 RASA4O43374 803 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 DAB1O75553 588 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 LCP1P13796 627 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 L1CAMP32004 1257 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 NOS2P35228 1153 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 MAGEA6P43360 314 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 MAGEA9P43362 315 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 GEMIN4P57678 1058 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 CCDC38Q502W7 563 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 MRPL10Q7Z7H8 261 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 PIGZQ86VD9 579 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 FUKQ8N0W3 1084 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 CABS1Q96KC9 395 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 KLC2Q9H0B6 622 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 SSU72Q9NP77 194 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 PSMC3IPQ9P2W1 217 aaPredicted RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 XPO7Q9UIA9 1087 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 AP4E1Q9UPM8 1137 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 SMG5Q9UPR3 1016 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.43□□□□□ -0.42
USP6NL-206ENST00000609853 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
USP6NL-206ENST00000609853 MYADML2A6NDP7 307 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PRPF4O43172 522 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ZNF623O75123 536 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ZBED1O96006 694 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CYP2F1P24903 491 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 AIF1P55008 147 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 YWHAZP63104 245 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 BASP1P80723 227 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ITIH4Q14624 930 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 KCNJ11Q14654 390 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ZNF618Q5T7W0 954 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 C1orf228Q6PIY5 440 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CXCL17Q6UXB2 119 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 TRABD2AQ86V40 505 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 OSTM1Q86WC4 334 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PALM2Q8IXS6 379 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PPM1EQ8WY54 764 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 NT5C3BQ969T7 300 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ACSS3Q9H6R3 686 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 LRRC4Q9HBW1 653 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 KCNK9Q9NPC2 374 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SAMD15Q9P1V8 674 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CTNNAL1Q9UBT7 734 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 HACD1B0YJ81 288 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 KCNN4O15554 427 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 GCATO75600 419 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SKIP12755 728 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 GCAP28676 217 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ARL4AP40617 200 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PSMC4P43686 418 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 MGAT3Q09327 533 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 FASTKD3Q14CZ7 662 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 RAB6CQ53S08 254 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ANKRD22Q5VYY1 191 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 NPNTQ6UXI9 565 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PIGWQ7Z7B1 504 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SRRM1Q8IYB3 904 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CYP4X1Q8N118 509 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SIX6OS1Q8N1H7 587 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 MCUQ8NE86 351 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 GSTCDQ8NEC7 633 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 SLC9A7Q96T83 725 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 FERMT1Q9BQL6 677 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 RAB6CQ9H0N0 254 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 DHX35Q9H5Z1 703 aaKnown RBP12.42□□□□□ -0.42
USP6NL-206ENST00000609853 RRN3Q9NYV6 651 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 RABGEF1Q9UJ41 708 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 HEY1Q9Y5J3 304 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 PTCH2Q9Y6C5 1203 aa12.42□□□□□ -0.42
USP6NL-206ENST00000609853 CLUHO75153 1309 aa12.41□□□□□ -0.42
USP6NL-206ENST00000609853 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.427e-8■■■■■ 60.3
USP6NL-206ENST00000609853 GOLGA8MH3BSY2 632 aa12.41□□□□□ -0.42
USP6NL-206ENST00000609853 HCRTO43612 131 aa12.41□□□□□ -0.42
USP6NL-206ENST00000609853 TMEM63AO94886 807 aa12.41□□□□□ -0.42
USP6NL-206ENST00000609853 CHRNA1P02708 482 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms