RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SIX4Q9UIU6 781 aa16.34■□□□□ 0.21
NEDD8-MDP1-204ENST00000605847 PRRT4C9JH25 899 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 RRP8O43159 456 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TYRP14679 529 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ITPKBP27987 946 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 OXTRP30559 389 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SMAD1Q15797 465 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SFR1Q86XK3 245 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SYCP3Q8IZU3 236 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 NXPE2Q96DL1 559 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 FCRL3Q96P31 734 aaPredicted RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ACCSQ96QU6 501 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 DUSP9Q99956 384 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 MRPL44Q9H9J2 332 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PDE11AQ9HCR9 933 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 WDR35Q9P2L0 1181 aa16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CHORDC1Q9UHD1 332 aaPredicted RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 EIF2B4Q9UI10 523 aaKnown RBP16.33■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 METTL12A8MUP2 240 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 WASH3PC4AMC7 463 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PLK4O00444 970 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CACNG3O60359 315 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TNNC2P02585 160 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ACADMP11310 421 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 DDIT3P35638 169 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GNL1P36915 607 aaPredicted RBP16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GRK6P43250 576 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 DGKGP49619 791 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TPGS1Q6ZTW0 290 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SNX19Q92543 992 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PRORYQ9H606 182 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CCSER2Q9H7U1 834 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ITM2CQ9NQX7 267 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 USP36Q9P275 1121 aaKnown RBP16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 BTBD3Q9Y2F9 522 aa16.32■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ACACAQ13085 2346 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 HELZ2Q9BYK8 2649 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 A0A1B0GVT2 93 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CAPN8A6NHC0 703 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 J3QKU1 62 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PRPF6O94906 941 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GARTP22102 1010 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 HNF1BP35680 557 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TUBP50607 506 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 AFF3P51826 1226 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 BNC1Q01954 994 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 KCNA1Q09470 495 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TEAD4Q15561 434 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 FUT11Q495W5 492 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 DHRS13Q6UX07 377 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 DYMQ7RTS9 669 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TMPRSS12Q86WS5 348 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ZNF843Q8N446 348 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 INTS13Q9NVM9 706 aa16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 LSM7Q9UK45 103 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 URB1O60287 2271 aaKnown RBP16.31■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 APC2O95996 2303 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SYNCRIPO60506 623 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GCNT3O95395 438 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PTPN1P18031 435 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 EIF2S3P41091 472 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TPMTP51580 245 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ZNF132P52740 706 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 CACNA2D1P54289 1103 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SEMG2Q02383 582 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 INAVAQ3KP66 663 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 BAP1Q92560 729 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PRCCQ92733 491 aaPredicted RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 MRPL45Q9BRJ2 306 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 NUP58Q9BVL2 599 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 MKRN2Q9H000 416 aaKnown RBP16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 SEL1LQ9UBV2 794 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 AK5Q9Y6K8 562 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 STON1Q9Y6Q2 735 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 ATP8B3O60423 1300 aa16.29■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 TEX51A0A1B0GUA7 166 aa16.29■□□□□ 0.2
NEDD8-MDP1-204ENST00000605847 KCNJ18B7U540 433 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms