RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 MICALL2Q8IY33 904 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 KIAA0895Q8NCT3 520 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 DLG3Q92796 817 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 TMEM121Q9BTD3 319 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 CHORDC1Q9UHD1 332 aaPredicted RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 RPL26L1Q9UNX3 145 aaKnown RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 AP3M1Q9Y2T2 418 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 DYNC1LI2O43237 492 aaPredicted RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 PMPCBO75439 489 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 RAB14P61106 215 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 CCDC81Q6ZN84 652 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 NIPA1Q7RTP0 329 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 ENOPH1Q9UHY7 261 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 ZC3H13Q5T200 1668 aaKnown RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 DYTNA2CJ06 578 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 FCHO1O14526 889 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 ARMCX4Q5H9R4 360 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 TAS1R2Q8TE23 839 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 SGF29Q96ES7 293 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 APOL5Q9BWW9 433 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 CRTAMO95727 393 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 MAD2L1Q13257 205 aaPredicted RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 CREG2Q8IUH2 290 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 LRRC71Q8N4P6 559 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 ASB2Q96Q27 587 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 LRRC4BQ9NT99 713 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 COMMD8Q9NX08 183 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 TMCC3Q9ULS5 477 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 C15orf38-AP3S2A0A0A6YYH1 394 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 BTNL10A8MVZ5 291 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 VPS4BO75351 444 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 DLGAP3O95886 979 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 PTPN11Q06124 597 aaPredicted RBP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 ARPINQ7Z6K5 226 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 SVOPQ8N4V2 548 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 ZNF398Q8TD17 642 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 TMEM176AQ96HP8 235 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 IARS2Q9NSE4 1012 aaKnown RBP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 ADAM30Q9UKF2 790 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 E2F8A0AVK6 867 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 ATP6AP1LQ52LC2 224 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 SPANXN3Q5MJ09 141 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 TDRD10Q5VZ19 366 aaKnown RBP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 KYAT3Q6YP21 454 aaKnown RBP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 MTMR12Q9C0I1 747 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 IMPDH2P12268 514 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 NINJ2Q9NZG7 142 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 DSEQ9UL01 958 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 KCNH4Q9UQ05 1017 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 HACD1B0YJ81 288 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 TPST1O60507 370 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 CNOT3O75175 753 aaKnown RBP21.7■■□□□ 1.06
SH3D19-211ENST00000604030 PRKCIP41743 596 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 CCDC142Q17RM4 750 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 MYO1HQ8N1T3 1032 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 CISHQ9NSE2 258 aa21.7■■□□□ 1.06
SH3D19-211ENST00000604030 SALL1Q9NSC2 1324 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 CRABP2P29373 138 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 RPL21P46778 160 aaKnown RBP21.69■■□□□ 1.06
SH3D19-211ENST00000604030 NPY2RP49146 381 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SV2AQ7L0J3 742 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SLC20A1Q8WUM9 679 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 BDH2Q9BUT1 245 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 KCNK4Q9NYG8 393 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 KCNQ2O43526 872 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 TRIM13O60858 407 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 CDK16Q00536 496 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SLC45A4Q5BKX6 768 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 CEP78Q5JTW2 689 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 CYP4Z1Q86W10 505 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 DEFB107AQ8IZN7 70 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 ZCCHC9Q8N567 271 aaKnown RBP21.69■■□□□ 1.06
SH3D19-211ENST00000604030 ACSF2Q96CM8 615 aaPredicted RBP21.69■■□□□ 1.06
SH3D19-211ENST00000604030 KAZALD1Q96I82 304 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 MLNP12872 115 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 PGAM1P18669 254 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SLC47A2Q86VL8 602 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SHCBP1LQ9BZQ2 653 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SH3BP1Q9Y3L3 701 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 GUCA1CO95843 209 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 CPT1AP50416 773 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 NCALDP61601 193 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 SH3RF1Q7Z6J0 888 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 ZBTB10Q96DT7 871 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 RMND5BQ96G75 393 aaPredicted RBP21.69■■□□□ 1.06
SH3D19-211ENST00000604030 DUSP9Q99956 384 aaKnown RBP21.69■■□□□ 1.06
SH3D19-211ENST00000604030 TRHDEQ9UKU6 1024 aa21.69■■□□□ 1.06
SH3D19-211ENST00000604030 TTKP33981 857 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 SLC1A6P48664 564 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 BST2Q10589 180 aaKnown RBP21.68■■□□□ 1.06
SH3D19-211ENST00000604030 ACBD5Q5T8D3 534 aaPredicted RBP21.68■■□□□ 1.06
SH3D19-211ENST00000604030 ATG4CQ96DT6 458 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 MRPL48Q96GC5 212 aaKnown RBP21.68■■□□□ 1.06
SH3D19-211ENST00000604030 SPATA17Q96L03 361 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 CPNE1Q99829 537 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.68■■□□□ 1.06
SH3D19-211ENST00000604030 TRIM24O15164 1050 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 AP1G2O75843 785 aa21.68■■□□□ 1.06
SH3D19-211ENST00000604030 DDHD2O94830 711 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms