RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 GREB1Q4ZG55 1949 aa9.11□□□□□ -0.95
DDX49-211ENST00000601772 NUP210Q8TEM1 1887 aaPredicted RBP9.11□□□□□ -0.95
DDX49-211ENST00000601772 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 GTPBP10A4D1E9 387 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 ZNF233A6NK53 670 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 TRIM66O15016 1216 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 AXIN1O15169 862 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 NCAM2O15394 837 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CCL16O15467 120 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ABLIM3O94929 683 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 FSBPO95073 299 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 OAZ2O95190 189 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 MOCS3O95396 460 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ITGB3P05106 788 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 HNRNPA1P09651 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX49-211ENST00000601772 CCDC172P0C7W6 258 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ODC1P11926 461 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CPB1P15086 417 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 PAX3P23760 479 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 HOXA9P31269 272 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 GBP1P32455 592 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 PRKCIP41743 596 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 TAF6P49848 677 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CYP2J2P51589 502 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 EIF3BP55884 814 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 TFAMQ00059 246 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 RPS6KA1Q15418 735 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ASIC2Q16515 512 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CCDC40Q4G0X9 1142 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 TDRD12Q587J7 1177 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 MEI1Q5TIA1 1274 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 AGBL2Q5U5Z8 902 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 HGSNATQ68CP4 663 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 LMBRD2Q68DH5 695 aaPredicted RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 TPRG1Q6ZUI0 275 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 HS2ST1Q7LGA3 356 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 MAATS1Q7Z4T9 603 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CCDC50Q8IVM0 306 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 TRIM59Q8IWR1 403 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 FAM160A2Q8N612 972 aaPredicted RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 C1orf127Q8N9H9 656 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 CCDC26Q8TAB7 109 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ZNF461Q8TAF7 563 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 NAP1L3Q99457 506 aaPredicted RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 ISCUQ9H1K1 167 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 EPN3Q9H201 632 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ARRDC1-AS1Q9H2J1 176 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 SMOC1Q9H4F8 434 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 SLITRK6Q9H5Y7 841 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ACTR5Q9H9F9 607 aaPredicted RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 KIAA1586Q9HCI6 787 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 FAM207AQ9NSI2 230 aaPredicted RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 DMGDHQ9UI17 866 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 TMEM59LQ9UK28 342 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX49-211ENST00000601772 FAM169AQ9Y6X4 670 aa9.1□□□□□ -0.95
DDX49-211ENST00000601772 ZNF638Q14966 1978 aaKnown RBP9.1□□□□□ -0.95
DDX49-211ENST00000601772 PTPRJQ12913 1337 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 NDUFAB1O14561 156 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 PRRG1O14668 218 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 ZNF185O15231 689 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 HRO43593 1189 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 SEC24AO95486 1093 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 CYP11A1P05108 521 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 TMEM191BP0C7N4 346 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 TDGF1P13385 188 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 LAMP2P13473 410 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 ATF2P15336 505 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 TYMPP19971 482 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 RPL13P26373 211 aaKnown RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 POLR2BP30876 1174 aaKnown RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 ELF1P32519 619 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 GTF2A1P52655 376 aaPredicted RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 NAP1L1P55209 391 aaKnown RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 KLHL30Q0D2K2 578 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 SURF1Q15526 300 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 SNRNP35Q16560 246 aaKnown RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 NFIL3Q16649 462 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 KNOP1Q1ED39 458 aaKnown RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 SV2CQ496J9 727 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 TPGS2Q68CL5 300 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 OVOS1Q6IE37 1185 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 GRASPQ7Z6J2 395 aaPredicted RBP9.09□□□□□ -0.95
DDX49-211ENST00000601772 USP37Q86T82 979 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 C12orf56Q8IXR9 622 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 OTUD6BQ8N6M0 293 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 ANKRD36BP1Q96IX9 119 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 ATP6V1G3Q96LB4 118 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 MKNK1Q9BUB5 465 aa9.09□□□□□ -0.95
DDX49-211ENST00000601772 RPP25Q9BUL9 199 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms