RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ARFGAP1Q8N6T3 406 aa23.59■■□□□ 1.37
IRF3-228ENST00000601291 GIPC2Q8TF65 315 aa23.59■■□□□ 1.37
IRF3-228ENST00000601291 CENPIQ92674 756 aaPredicted RBP23.59■■□□□ 1.37
IRF3-228ENST00000601291 TBCBQ99426 244 aa23.59■■□□□ 1.37
IRF3-228ENST00000601291 DDX56Q9NY93 547 aaKnown RBP23.59■■□□□ 1.37
IRF3-228ENST00000601291 USP18Q9UMW8 372 aa23.59■■□□□ 1.37
IRF3-228ENST00000601291 NAALADL1Q9UQQ1 740 aa23.59■■□□□ 1.37
IRF3-228ENST00000601291 C2orf71A6NGG8 1288 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 GRM6O15303 877 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 CSPG5O95196 566 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 TCF4P15884 667 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 DNAJB1P25685 340 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 BMP8BP34820 402 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 USP46P62068 366 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 PLD1Q13393 1074 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 GPM6BQ13491 265 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 CLUL1Q15846 466 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 ODF2Q5BJF6 829 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 SH3PXD2AQ5TCZ1 1133 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 SYPL2Q5VXT5 272 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 PDE12Q6L8Q7 609 aaKnown RBP23.58■■□□□ 1.37
IRF3-228ENST00000601291 MNS1Q8NEH6 495 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 NT5C3BQ969T7 300 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 NPY6RQ99463 290 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 INSL5Q9Y5Q6 135 aa23.58■■□□□ 1.37
IRF3-228ENST00000601291 H3BNC9 293 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 FSCN2O14926 492 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 TGM5O43548 720 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 FYNP06241 537 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 CSH1P0DML2 217 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 CSH2P0DML3 217 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 PSEN1P49768 467 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 PPP2R2DQ66LE6 453 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 EDEM1Q92611 657 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 SLITRK1Q96PX8 696 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 TTLL2Q9BWV7 592 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 CARD6Q9BX69 1037 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 NKX2-4Q9H2Z4 354 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 ZWILCHQ9H900 591 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 PCSK1NQ9UHG2 260 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 A0A1W2PQH9 124 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 M0QYT0 321 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 SLU7O95391 586 aaKnown RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 KRT1P04264 644 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 RDXP35241 583 aaKnown RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 HDAC4P56524 1084 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 ZNF211Q13398 564 aaPredicted RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 MTMR3Q13615 1198 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 TAF12Q16514 161 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 SCYL2Q6P3W7 929 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 CCDC149Q6ZUS6 474 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 RASGEF1CQ8N431 466 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 EXD1Q8NHP7 514 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 SLC7A14Q8TBB6 771 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 ACTRT1Q8TDG2 376 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 RBM41Q96IZ5 413 aaKnown RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 TLR8Q9NR97 1041 aaKnown RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 GMIPQ9P107 970 aa23.57■■□□□ 1.36
IRF3-228ENST00000601291 MAGED2Q9UNF1 606 aaPredicted RBP23.57■■□□□ 1.36
IRF3-228ENST00000601291 MYO16Q9Y6X6 1858 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 COL4A4P53420 1690 aaPredicted RBP23.56■■□□□ 1.36
IRF3-228ENST00000601291 HIDE1A8MVS5 230 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 PGRMC1O00264 195 aaKnown RBP23.56■■□□□ 1.36
IRF3-228ENST00000601291 ZRANB2O95218 330 aaKnown RBP eCLIP23.56■■□□□ 1.36
IRF3-228ENST00000601291 TRUB2O95900 331 aaKnown RBP23.56■■□□□ 1.36
IRF3-228ENST00000601291 GLUD1P00367 558 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 TFE3P19532 575 aaPredicted RBP23.56■■□□□ 1.36
IRF3-228ENST00000601291 CETN2P41208 172 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 EPHB3P54753 998 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 DEUP1Q05D60 604 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 TWF1Q12792 350 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 TAF10Q12962 218 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 SCD5Q86SK9 330 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 CCDC50Q8IVM0 306 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 TDHQ8IZJ6 230 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 RNF139Q8WU17 664 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 MS4A14Q96JA4 679 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 NAP1L3Q99457 506 aaPredicted RBP23.56■■□□□ 1.36
IRF3-228ENST00000601291 FAM204AQ9H8W3 233 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 FBXW11Q9UKB1 542 aa23.56■■□□□ 1.36
IRF3-228ENST00000601291 PLXNA3P51805 1871 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 CTAGE15A4D2H0 777 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 ENDOD1O94919 500 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 CTAGE8P0CG41 777 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 PYGMP11217 842 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 IL1R2P27930 398 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 BOLA3Q53S33 107 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 BNIPLQ7Z465 357 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 CTAGE6Q86UF2 777 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 CTAGE4Q8IX94 777 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 RCOR2Q8IZ40 523 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 PDZD8Q8NEN9 1154 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 OVCA2Q8WZ82 227 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 PGAP3Q96FM1 320 aaPredicted RBP23.55■■□□□ 1.36
IRF3-228ENST00000601291 SLC28A3Q9HAS3 691 aa23.55■■□□□ 1.36
IRF3-228ENST00000601291 TTC7AQ9ULT0 858 aaPredicted RBP23.55■■□□□ 1.36
IRF3-228ENST00000601291 F9P00740 461 aa23.54■■□□□ 1.36
IRF3-228ENST00000601291 RALAP11233 206 aa23.54■■□□□ 1.36
IRF3-228ENST00000601291 GBP1P32455 592 aa23.54■■□□□ 1.36
IRF3-228ENST00000601291 NME3Q13232 169 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms