RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 NDUFS2O75306 463 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 PSMD6Q15008 389 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 SNRNP35Q16560 246 aaKnown RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 COL28A1Q2UY09 1125 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 SOWAHCQ53LP3 525 aaPredicted RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 CCNI2Q6ZMN8 369 aaPredicted RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 PDZD3Q86UT5 571 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 FAM35AQ86V20 835 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 ZNF516Q92618 1163 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 XPO6Q96QU8 1125 aaKnown RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 NXF1Q9UBU9 619 aaKnown RBP17.76■□□□□ 0.43
USE1-208ENST00000600970 SUSD2Q9UGT4 822 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 LOC400499M0QZD8 3231 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 ATP8B3O60423 1300 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 DSPP15924 2871 aaKnown RBP17.75■□□□□ 0.43
USE1-208ENST00000600970 FAM92AA1XBS5 289 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
USE1-208ENST00000600970 NEDD8-MDP1E9PL57 170 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 GREM1O60565 184 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 TYRP14679 529 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 GNSP15586 552 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 MAOBP27338 520 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 PGFP49763 221 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 MYL6P60660 151 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 CYP24A1Q07973 514 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 GRIK2Q13002 908 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 TOGARAM2Q6ZUX3 1019 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 SCFD1Q8WVM8 642 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 CCDC127Q96BQ5 260 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 MRGPRX1Q96LB2 322 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 MED10Q9BTT4 135 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 BBS2Q9BXC9 721 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 TRIM9Q9C026 710 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 NACA2Q9H009 215 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 XYLT2Q9H1B5 865 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 CCDC86Q9H6F5 360 aaKnown RBP17.75■□□□□ 0.43
USE1-208ENST00000600970 DMAP1Q9NPF5 467 aaPredicted RBP17.75■□□□□ 0.43
USE1-208ENST00000600970 COMMD8Q9NX08 183 aa17.75■□□□□ 0.43
USE1-208ENST00000600970 WASH3PC4AMC7 463 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 EIF3DO15371 548 aaKnown RBP eCLIP17.74■□□□□ 0.43
USE1-208ENST00000600970 TGFB1I1O43294 461 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 TLR5O60602 858 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 ATICP31939 592 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 CDH8P55286 799 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 CEBPZQ03701 1054 aaKnown RBP17.74■□□□□ 0.43
USE1-208ENST00000600970 TRPC3Q13507 836 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 KIAA1324Q6UXG2 1013 aaKnown RBP17.74■□□□□ 0.43
USE1-208ENST00000600970 TPGS1Q6ZTW0 290 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 GLRX5Q86SX6 157 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 ZNF507Q8TCN5 953 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 FOXJ1Q92949 421 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 SMARCD1Q96GM5 515 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 KLF16Q9BXK1 252 aaPredicted RBP17.74■□□□□ 0.43
USE1-208ENST00000600970 ZDHHC5Q9C0B5 715 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 GZF1Q9H116 711 aaPredicted RBP17.74■□□□□ 0.43
USE1-208ENST00000600970 SMYD3Q9H7B4 428 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 AGPAT3Q9NRZ7 376 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 CACNA2D2Q9NY47 1150 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 MARK1Q9P0L2 795 aa17.74■□□□□ 0.43
USE1-208ENST00000600970 APOBEC2Q9Y235 224 aaKnown RBP17.74■□□□□ 0.43
USE1-208ENST00000600970 MYH10P35580 1976 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 GFRA2O00451 464 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 CLIC2O15247 247 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 CBFA2T3O75081 653 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 TBX18O95935 607 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 CYP2J2P51589 502 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 WDR45BQ5MNZ6 344 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 EPM2AIP1Q7L775 607 aaPredicted RBP17.73■□□□□ 0.43
USE1-208ENST00000600970 SLCO6A1Q86UG4 719 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 FUKQ8N0W3 1084 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 PDILTQ8N807 584 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 ZMIZ2Q8NF64 920 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 MDM1Q8TC05 714 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
USE1-208ENST00000600970 WDR35Q9P2L0 1181 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 PCOLCE2Q9UKZ9 415 aa17.73■□□□□ 0.43
USE1-208ENST00000600970 AP1G2O75843 785 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 BEST1O76090 585 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 CISD3P0C7P0 127 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 CD6P30203 668 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 DGKGP49619 791 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 XXYLT1Q8NBI6 393 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 SPRYD3Q8NCJ5 442 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 DNASE2BQ8WZ79 361 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 SMOQ99835 787 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 VRTNQ9H8Y1 702 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 TLR8Q9NR97 1041 aaKnown RBP17.72■□□□□ 0.43
USE1-208ENST00000600970 KRT82Q9NSB4 513 aa17.72■□□□□ 0.43
USE1-208ENST00000600970 A0A1B0GTW7 788 aa17.71■□□□□ 0.43
USE1-208ENST00000600970 ERICH6BQ5W0A0 696 aa17.71■□□□□ 0.43
USE1-208ENST00000600970 METTL3Q86U44 580 aaKnown RBP17.71■□□□□ 0.43
USE1-208ENST00000600970 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
USE1-208ENST00000600970 TOE1Q96GM8 510 aaKnown RBP17.71■□□□□ 0.43
USE1-208ENST00000600970 SDCBP2Q9H190 292 aa17.71■□□□□ 0.43
USE1-208ENST00000600970 TNMDQ9H2S6 317 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms