RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 LCP1P13796 627 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 ZNF165P49910 485 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 YWHAGP61981 247 aaKnown RBP eCLIP14.55□□□□□ -0.08
UPF1-205ENST00000598209 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
UPF1-205ENST00000598209 DENND1BQ6P3S1 775 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 KLHDC10Q6PID8 442 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 BHLHA9Q7RTU4 235 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 TADA2BQ86TJ2 420 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 DHX40Q8IX18 779 aaKnown RBP14.55□□□□□ -0.08
UPF1-205ENST00000598209 ZNF687Q8N1G0 1237 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 HSFY1Q96LI6 401 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 CDK5RAP1Q96SZ6 601 aaKnown RBP14.55□□□□□ -0.08
UPF1-205ENST00000598209 KLF16Q9BXK1 252 aaPredicted RBP14.55□□□□□ -0.08
UPF1-205ENST00000598209 PLCB1Q9NQ66 1216 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 CNGB3Q9NQW8 809 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 DNMT3LQ9UJW3 386 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 SH3BP1Q9Y3L3 701 aa14.55□□□□□ -0.08
UPF1-205ENST00000598209 ARIH1Q9Y4X5 557 aaPredicted RBP14.55□□□□□ -0.08
UPF1-205ENST00000598209 CACNA1IQ9P0X4 2223 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 LGALS16A8MUM7 142 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 PIK3R2O00459 728 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 SLC9A3R1O14745 358 aaPredicted RBP14.54□□□□□ -0.08
UPF1-205ENST00000598209 NFATC1O95644 943 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 ATP1A3P13637 1013 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 UCHL3P15374 230 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 GPD2P43304 727 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 KLK7P49862 253 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 PTK2Q05397 1052 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 FZD5Q13467 585 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 PON2Q15165 354 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 MEA1Q16626 185 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 SKOR2Q2VWA4 1001 aaPredicted RBP14.54□□□□□ -0.08
UPF1-205ENST00000598209 FAM71AQ8IYT1 594 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 SCML4Q8N228 414 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 WBP2Q969T9 261 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 CLDN23Q96B33 292 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 CHFRQ96EP1 664 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
UPF1-205ENST00000598209 GANQ9H2C0 597 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 TBC1D14Q9P2M4 693 aa14.54□□□□□ -0.08
UPF1-205ENST00000598209 MUC6Q6W4X9 2439 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 LRRC10BA6NIK2 292 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 YJEFN3A6XGL0 299 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 E7ENQ6 273 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 GJA4P35212 333 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 CLCN1P35523 988 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 MAGEA9P43362 315 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 DAOAP59103 153 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 AMPD2Q01433 879 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 UBXN1Q04323 297 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 GOLGA8FQ08AF8 430 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 GOLGA8DPQ0D2H9 430 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 EFEMP1Q12805 493 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 TCF15Q12870 199 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 NR1H3Q13133 447 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 BTBD8Q5XKL5 378 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 RSRC2Q7L4I2 434 aaKnown RBP14.53□□□□□ -0.08
UPF1-205ENST00000598209 APTXQ7Z2E3 356 aaKnown RBP14.53□□□□□ -0.08
UPF1-205ENST00000598209 SLC47A2Q86VL8 602 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 MIB1Q86YT6 1006 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 LMAN1LQ9HAT1 526 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 ST7Q9NRC1 585 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 FAM207AQ9NSI2 230 aaPredicted RBP14.53□□□□□ -0.08
UPF1-205ENST00000598209 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 SIK3Q9Y2K2 1263 aa14.53□□□□□ -0.08
UPF1-205ENST00000598209 FBXO21O94952 628 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 CYP17A1P05093 508 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 CHRNB1P11230 501 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 ACADSBP45954 432 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 RPS9P46781 194 aaKnown RBP14.52□□□□□ -0.09
UPF1-205ENST00000598209 RPL34P49207 117 aaKnown RBP14.52□□□□□ -0.09
UPF1-205ENST00000598209 PTPN5P54829 565 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 BPIFB4P59827 614 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 IQCB1Q15051 598 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 SYCP1Q15431 976 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 BSPRYQ5W0U4 402 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 HTR3DQ70Z44 454 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 BBS7Q8IWZ6 715 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 ADGRG2Q8IZP9 1017 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 CLEC4CQ8WTT0 213 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 STK32AQ8WU08 396 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 IRGQQ8WZA9 623 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 OTUB2Q96DC9 234 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 PCMTD1Q96MG8 357 aaPredicted RBP14.52□□□□□ -0.09
UPF1-205ENST00000598209 STK33Q9BYT3 514 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 MIS12Q9H081 205 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 OLA1Q9NTK5 396 aaKnown RBP14.52□□□□□ -0.09
UPF1-205ENST00000598209 MARCH2Q9P0N8 246 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 CYTH4Q9UIA0 394 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 LSM7Q9UK45 103 aaKnown RBP14.52□□□□□ -0.09
UPF1-205ENST00000598209 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 KIAA1549LQ6ZVL6 1849 aa14.52□□□□□ -0.09
UPF1-205ENST00000598209 F8VZ95 297 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 H0Y858 1186 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 TRDMT1O14717 391 aaKnown RBP14.51□□□□□ -0.09
UPF1-205ENST00000598209 EPHB6O15197 1021 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 GREM1O60565 184 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 STC2O76061 302 aa14.51□□□□□ -0.09
UPF1-205ENST00000598209 KRT9P35527 623 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms