RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 DNMT3LQ9UJW3 386 aa18.88■□□□□ 0.61
CHMP2A-203ENST00000597209 SPTBN4Q9H254 2564 aa18.88■□□□□ 0.61
CHMP2A-203ENST00000597209 PRR5-ARHGAP8B1AHC4 643 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 AXIN1O15169 862 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 RPP40O75818 363 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 KAT7O95251 611 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 APBB3O95704 486 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 SDHBP21912 280 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 TNFRSF4P43489 277 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 PXNP49023 591 aaPredicted RBP18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 SLC8A3P57103 927 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 ARHGAP8P85298 464 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 LMNB2Q03252 620 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 BTBD8Q5XKL5 378 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 CACNA2D4Q7Z3S7 1137 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 C12orf40Q86WS4 652 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 PHTF2Q8N3S3 785 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 NELFBQ8WX92 580 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 ATG2BQ96BY7 2078 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 PARD6AQ9NPB6 346 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 POLR3BQ9NW08 1133 aaPredicted RBP18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 DLL3Q9NYJ7 618 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 LSM7Q9UK45 103 aaKnown RBP18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 KIAA1257Q9ULG3 409 aa18.87■□□□□ 0.61
CHMP2A-203ENST00000597209 WDR87Q6ZQQ6 2873 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 GNA14O95837 355 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 IRF1P10914 325 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 RALAP11233 206 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 PUM1Q14671 1186 aaKnown RBP eCLIP18.86■□□□□ 0.612e-7■■■□□ 17.1
CHMP2A-203ENST00000597209 CCDC40Q4G0X9 1142 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 PIGZQ86VD9 579 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 ARHGAP18Q8N392 663 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 FAM160A2Q8N612 972 aaPredicted RBP18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 TRIML1Q8N9V2 468 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 ZC3H10Q96K80 434 aaKnown RBP18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 ARHGEF4Q9NR80 690 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 MARK1Q9P0L2 795 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 NAGPAQ9UK23 515 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 MMP17Q9ULZ9 603 aa18.86■□□□□ 0.61
CHMP2A-203ENST00000597209 FOXD2O60548 495 aaPredicted RBP18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 VDRP11473 427 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 KIR2DL1P43626 348 aaPredicted RBP18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 SEC13P55735 322 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 MARSP56192 900 aaKnown RBP18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 SPEM2Q0P670 501 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 CETN1Q12798 172 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 SGO2Q562F6 1265 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 C2orf27AQ580R0 203 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 C10orf120Q5SQS8 335 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 PM20D1Q6GTS8 502 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 Q6ZNB5 142 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 TTC30AQ86WT1 665 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 TMEM25Q86YD3 366 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 LMO3Q8TAP4 145 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 KCNV2Q8TDN2 545 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 NT5C1BQ96P26 610 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 TSPAN16Q9UKR8 245 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 USP18Q9UMW8 372 aa18.85■□□□□ 0.61
CHMP2A-203ENST00000597209 XPO1O14980 1071 aaKnown RBP18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 TULP3O75386 442 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 PAEPP09466 180 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 CCDC192P0DO97 292 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 BCAT1P54687 386 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 UBE2HP62256 183 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 COG7P83436 770 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 BST2Q10589 180 aaKnown RBP18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 LRMPQ12912 555 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 PAK1Q13153 545 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 CSRP2Q16527 193 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 RSPO4Q2I0M5 234 aaPredicted RBP18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 NUDT18Q6ZVK8 323 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 RASSF3Q86WH2 238 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 TRIM59Q8IWR1 403 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 IL17RCQ8NAC3 791 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 TSTD1Q8NFU3 115 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 SEMA4GQ9NTN9 838 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 WDR35Q9P2L0 1181 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 DEC1Q9P2X7 70 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 HESX1Q9UBX0 185 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 CTNND2Q9UQB3 1225 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 ZNF510Q9Y2H8 683 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 MYOFQ9NZM1 2061 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 EML5Q05BV3 1969 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 FRYLO94915 3013 aa18.84■□□□□ 0.61
CHMP2A-203ENST00000597209 BIN1O00499 593 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 STC2O76061 302 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 DGKEP52429 567 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 PDE4CQ08493 712 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 CRY1Q16526 586 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 GOLGA7BQ2TAP0 167 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 ANO4Q32M45 955 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 CHMP5Q9NZZ3 219 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 NUDT5Q9UKK9 219 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 STARD13Q9Y3M8 1113 aa18.83■□□□□ 0.6
CHMP2A-203ENST00000597209 TBC1D3BA6NDS4 549 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms