RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ITIH6Q6UXX5 1313 aa15.06■□□□□ 0
LIG1-208ENST00000595758 LEFTY2O00292 366 aa15.05■□□□□ -0
LIG1-208ENST00000595758 CHADO15335 359 aa15.05■□□□□ -0
LIG1-208ENST00000595758 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ -0
LIG1-208ENST00000595758 TCF3P15923 654 aa15.05■□□□□ -0
LIG1-208ENST00000595758 ZXDBP98169 803 aa15.05■□□□□ -0
LIG1-208ENST00000595758 FMO1Q01740 532 aa15.05■□□□□ -0
LIG1-208ENST00000595758 PFKPQ01813 784 aa15.05■□□□□ -0
LIG1-208ENST00000595758 ZNF77Q15935 545 aa15.05■□□□□ -0
LIG1-208ENST00000595758 ARHGAP29Q52LW3 1261 aa15.05■□□□□ -0
LIG1-208ENST00000595758 NAA35Q5VZE5 725 aa15.05■□□□□ -0
LIG1-208ENST00000595758 SPECC1LQ69YQ0 1117 aa15.05■□□□□ -0
LIG1-208ENST00000595758 CC2D1AQ6P1N0 951 aaPredicted RBP15.05■□□□□ -0
LIG1-208ENST00000595758 TRIM72Q6ZMU5 477 aa15.05■□□□□ -0
LIG1-208ENST00000595758 TRIM67Q6ZTA4 783 aa15.05■□□□□ -0
LIG1-208ENST00000595758 DDX42Q86XP3 938 aaKnown RBP eCLIP15.05■□□□□ -0
LIG1-208ENST00000595758 RIN3Q8TB24 985 aa15.05■□□□□ -0
LIG1-208ENST00000595758 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
LIG1-208ENST00000595758 IRF7Q92985 503 aa15.05■□□□□ -0
LIG1-208ENST00000595758 AGPAT1Q99943 283 aa15.05■□□□□ -0
LIG1-208ENST00000595758 TRIM5Q9C035 493 aa15.05■□□□□ -0
LIG1-208ENST00000595758 NUCKS1Q9H1E3 243 aaKnown RBP15.05■□□□□ -0
LIG1-208ENST00000595758 GKN1Q9NS71 199 aa15.05■□□□□ -0
LIG1-208ENST00000595758 ABCC13Q9NSE7 274 aa15.05■□□□□ -0
LIG1-208ENST00000595758 CFAP97Q9P2B7 532 aa15.05■□□□□ -0
LIG1-208ENST00000595758 FBXL21Q9UKT6 434 aa15.05■□□□□ -0
LIG1-208ENST00000595758 CAPN11Q9UMQ6 739 aa15.05■□□□□ -0
LIG1-208ENST00000595758 LUC7L2Q9Y383 392 aaKnown RBP15.05■□□□□ -0
LIG1-208ENST00000595758 NUP210Q8TEM1 1887 aaPredicted RBP15.05■□□□□ -0
LIG1-208ENST00000595758 MYO16Q9Y6X6 1858 aa15.04■□□□□ -0
LIG1-208ENST00000595758 MDM4O15151 490 aa15.04■□□□□ -0
LIG1-208ENST00000595758 AP5Z1O43299 807 aa15.04■□□□□ -0
LIG1-208ENST00000595758 LTFP02788 710 aa15.04■□□□□ -0
LIG1-208ENST00000595758 ERBB2P04626 1255 aa15.04■□□□□ -0
LIG1-208ENST00000595758 CYP1A1P04798 512 aaPredicted RBP15.04■□□□□ -0
LIG1-208ENST00000595758 NOMO3P69849 1222 aa15.04■□□□□ -0
LIG1-208ENST00000595758 ZBED6P86452 979 aa15.04■□□□□ -0
LIG1-208ENST00000595758 SIGLEC14Q08ET2 396 aa15.04■□□□□ -0
LIG1-208ENST00000595758 EFEMP1Q12805 493 aa15.04■□□□□ -0
LIG1-208ENST00000595758 USP4Q13107 963 aa15.04■□□□□ -0
LIG1-208ENST00000595758 MTF1Q14872 753 aa15.04■□□□□ -0
LIG1-208ENST00000595758 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
LIG1-208ENST00000595758 HFE2Q6ZVN8 426 aa15.04■□□□□ -0
LIG1-208ENST00000595758 ERICH1Q86X53 443 aa15.04■□□□□ -0
LIG1-208ENST00000595758 MIB1Q86YT6 1006 aa15.04■□□□□ -0
LIG1-208ENST00000595758 VSTM4Q8IW00 320 aa15.04■□□□□ -0
LIG1-208ENST00000595758 MSANTD4Q8NCY6 345 aa15.04■□□□□ -0
LIG1-208ENST00000595758 RNF139Q8WU17 664 aa15.04■□□□□ -0
LIG1-208ENST00000595758 CPA5Q8WXQ8 436 aa15.04■□□□□ -0
LIG1-208ENST00000595758 EDEM1Q92611 657 aa15.04■□□□□ -0
LIG1-208ENST00000595758 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
LIG1-208ENST00000595758 KLF16Q9BXK1 252 aaPredicted RBP15.04■□□□□ -0
LIG1-208ENST00000595758 OLA1Q9NTK5 396 aaKnown RBP15.04■□□□□ -0
LIG1-208ENST00000595758 SEPT11Q9NVA2 429 aaKnown RBP15.04■□□□□ -0
LIG1-208ENST00000595758 MARCH2Q9P0N8 246 aa15.04■□□□□ -0
LIG1-208ENST00000595758 WNT16Q9UBV4 365 aa15.04■□□□□ -0
LIG1-208ENST00000595758 TJP2Q9UDY2 1190 aa15.04■□□□□ -0
LIG1-208ENST00000595758 FAM170AA1A519 330 aa15.03■□□□□ -0
LIG1-208ENST00000595758 GYPCP04921 128 aa15.03■□□□□ -0
LIG1-208ENST00000595758 TNFAIP3P21580 790 aa15.03■□□□□ -0
LIG1-208ENST00000595758 GOLGA8FQ08AF8 430 aa15.03■□□□□ -0
LIG1-208ENST00000595758 GOLGA8DPQ0D2H9 430 aa15.03■□□□□ -0
LIG1-208ENST00000595758 KLHL30Q0D2K2 578 aa15.03■□□□□ -0
LIG1-208ENST00000595758 PDGFRLQ15198 375 aa15.03■□□□□ -0
LIG1-208ENST00000595758 E4F1Q66K89 784 aaPredicted RBP15.03■□□□□ -0
LIG1-208ENST00000595758 OR6B2Q6IFH4 312 aa15.03■□□□□ -0
LIG1-208ENST00000595758 KIAA1958Q8N8K9 716 aa15.03■□□□□ -0
LIG1-208ENST00000595758 SYN2Q92777 582 aaPredicted RBP15.03■□□□□ -0
LIG1-208ENST00000595758 DNASE1L2Q92874 299 aa15.03■□□□□ -0
LIG1-208ENST00000595758 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
LIG1-208ENST00000595758 C18orf8Q96DM3 657 aa15.03■□□□□ -0
LIG1-208ENST00000595758 ZFRQ96KR1 1074 aaKnown RBP15.03■□□□□ -0
LIG1-208ENST00000595758 PCDHB18PQ96TA0 734 aa15.03■□□□□ -0
LIG1-208ENST00000595758 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
LIG1-208ENST00000595758 TRIM62Q9BVG3 475 aa15.03■□□□□ -0
LIG1-208ENST00000595758 TRPV5Q9NQA5 729 aa15.03■□□□□ -0
LIG1-208ENST00000595758 DUS2Q9NX74 493 aaKnown RBP15.03■□□□□ -0
LIG1-208ENST00000595758 RASAL2Q9UJF2 1139 aa15.03■□□□□ -0
LIG1-208ENST00000595758 STRIP2Q9ULQ0 834 aa15.03■□□□□ -0
LIG1-208ENST00000595758 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
LIG1-208ENST00000595758 E2F8A0AVK6 867 aa15.02■□□□□ -0
LIG1-208ENST00000595758 TPM1P09493 284 aa15.02■□□□□ -0
LIG1-208ENST00000595758 IRF1P10914 325 aa15.02■□□□□ -0
LIG1-208ENST00000595758 NCAM1P13591 858 aa15.02■□□□□ -0
LIG1-208ENST00000595758 CASP14P31944 242 aa15.02■□□□□ -0
LIG1-208ENST00000595758 PRKCIP41743 596 aa15.02■□□□□ -0
LIG1-208ENST00000595758 GABRB2P47870 512 aa15.02■□□□□ -0
LIG1-208ENST00000595758 IFNAR2P48551 515 aa15.02■□□□□ -0
LIG1-208ENST00000595758 YWHAZP63104 245 aaKnown RBP15.02■□□□□ -0
LIG1-208ENST00000595758 COG7P83436 770 aa15.02■□□□□ -0
LIG1-208ENST00000595758 SLC6A3Q01959 620 aa15.02■□□□□ -0
LIG1-208ENST00000595758 TRIM14Q14142 442 aa15.02■□□□□ -0
LIG1-208ENST00000595758 TAF5Q15542 800 aa15.02■□□□□ -0
LIG1-208ENST00000595758 CLEC16AQ2KHT3 1053 aa15.02■□□□□ -0
LIG1-208ENST00000595758 SLC44A4Q53GD3 710 aa15.02■□□□□ -0
LIG1-208ENST00000595758 EFHC1Q5JVL4 640 aa15.02■□□□□ -0
LIG1-208ENST00000595758 TOGARAM2Q6ZUX3 1019 aa15.02■□□□□ -0
LIG1-208ENST00000595758 FAM183BPQ6ZVS7 135 aa15.02■□□□□ -0
LIG1-208ENST00000595758 BEND5Q7L4P6 421 aa15.02■□□□□ -0
LIG1-208ENST00000595758 ZDHHC17Q8IUH5 632 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms