RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 F8VZ95 297 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 NCAM2O15394 837 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 TBX18O95935 607 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 PNMA6AP0CW24 399 aaPredicted RBP15.77■□□□□ 0.12
UPF1-202ENST00000594243 CYP11B1P15538 503 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 RPL34P49207 117 aaKnown RBP15.77■□□□□ 0.12
UPF1-202ENST00000594243 DAOAP59103 153 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 TNK2Q07912 1038 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 NR1H3Q13133 447 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 C10orf120Q5SQS8 335 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 CWF19L1Q69YN2 538 aaKnown RBP15.77■□□□□ 0.12
UPF1-202ENST00000594243 TRIM68Q6AZZ1 485 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 LUZP1Q86V48 1076 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 RALGPS2Q86X27 583 aaPredicted RBP15.77■□□□□ 0.12
UPF1-202ENST00000594243 FAM3CQ92520 227 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 GOLGA1Q92805 767 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 PDCL3Q9H2J4 239 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 EBF3Q9H4W6 596 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 OLA1Q9NTK5 396 aaKnown RBP15.77■□□□□ 0.12
UPF1-202ENST00000594243 CFAP97Q9P2B7 532 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 HCN4Q9Y3Q4 1203 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 CEP83Q9Y592 693 aa15.77■□□□□ 0.12
UPF1-202ENST00000594243 SART1O43290 800 aaKnown RBP15.76■□□□□ 0.11
UPF1-202ENST00000594243 NFATC1O95644 943 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 CD72P21854 359 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 STAT1P42224 750 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 NUBP1P53384 320 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 SNX16P57768 344 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 COG7P83436 770 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 EML3Q32P44 896 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 BSPRYQ5W0U4 402 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 RSRC2Q7L4I2 434 aaKnown RBP15.76■□□□□ 0.11
UPF1-202ENST00000594243 TMEM110Q86TL2 294 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 ADGRG2Q8IZP9 1017 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 PJA1Q8NG27 643 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 TTC8Q8TAM2 541 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 RNF139Q8WU17 664 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 EXOC4Q96A65 974 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 OTUB2Q96DC9 234 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 ZFRQ96KR1 1074 aaKnown RBP15.76■□□□□ 0.11
UPF1-202ENST00000594243 NOX5Q96PH1 765 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 PRRX2Q99811 253 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 KLF16Q9BXK1 252 aaPredicted RBP15.76■□□□□ 0.11
UPF1-202ENST00000594243 SLC4A5Q9BY07 1137 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 MIS12Q9H081 205 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 LINC00597Q9H2U6 94 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 NLRC4Q9NPP4 1024 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 HPS4Q9NQG7 708 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 NUDT5Q9UKK9 219 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 STRIP2Q9ULQ0 834 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 WNT6Q9Y6F9 365 aa15.76■□□□□ 0.11
UPF1-202ENST00000594243 A0A1B0GTH6 734 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 FAM170BA6NMN3 283 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 YJEFN3A6XGL0 299 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 E7ENQ6 273 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 SPECC1L-ADORA2AF8WAN1 911 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 PIK3R2O00459 728 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 TEX33O43247 280 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 PI15O43692 258 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 GABBR2O75899 941 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 SOX5P35711 763 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 JAM2P57087 298 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 UBXN2BQ14CS0 331 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 LRSAM1Q6UWE0 723 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 HTR3DQ70Z44 454 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 BHLHA9Q7RTU4 235 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 CACNA2D4Q7Z3S7 1137 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 ZNF677Q86XU0 584 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 SCUBE3Q8IX30 993 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 TMEM105Q8N8V8 129 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 NDRG1Q92597 394 aaKnown RBP15.75■□□□□ 0.11
UPF1-202ENST00000594243 KCNH6Q9H252 994 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 ECT2Q9H8V3 914 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
UPF1-202ENST00000594243 LSM7Q9UK45 103 aaKnown RBP15.75■□□□□ 0.11
UPF1-202ENST00000594243 A0A1W2PQC6 194 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 EPHB6O15197 1021 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 GFPT2O94808 682 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 ARSAP15289 507 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 CTHP32929 405 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 VCPP55072 806 aaKnown RBP15.74■□□□□ 0.11
UPF1-202ENST00000594243 EFEMP1Q12805 493 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 PDCLQ13371 301 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 NR1I3Q14994 352 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 MIB1Q86YT6 1006 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 PASD1Q8IV76 773 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 WDTC1Q8N5D0 677 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 TMEM35BQ8NCS4 154 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 PPP1R13BQ96KQ4 1090 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 NAP1L5Q96NT1 182 aaPredicted RBP15.74■□□□□ 0.11
UPF1-202ENST00000594243 TRIM62Q9BVG3 475 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 FOXQ1Q9C009 403 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 MARCH2Q9P0N8 246 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 CYTH4Q9UIA0 394 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 RASAL2Q9UJF2 1139 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 TECTAO75443 2155 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 MUC6Q6W4X9 2439 aa15.74■□□□□ 0.11
UPF1-202ENST00000594243 OTOL1A6NHN0 477 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms