RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MYOFQ9NZM1 2061 aa14□□□□□ -0.17
APOC1-209ENST00000592885 BCLAF3A2AJT9 711 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 SCAMP3O14828 347 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 CETN3O15182 167 aa14□□□□□ -0.17
APOC1-209ENST00000592885 SLC16A3O15427 465 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 GDF9O60383 454 aa14□□□□□ -0.17
APOC1-209ENST00000592885 KLF8O95600 359 aaPredicted RBP14□□□□□ -0.17
APOC1-209ENST00000592885 EPB41P11171 864 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 GBP1P32455 592 aa14□□□□□ -0.17
APOC1-209ENST00000592885 KDSRQ06136 332 aa14□□□□□ -0.17
APOC1-209ENST00000592885 BYSLQ13895 437 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 SF3A2Q15428 464 aaKnown RBP14□□□□□ -0.17
APOC1-209ENST00000592885 PPM1JQ5JR12 505 aa14□□□□□ -0.17
APOC1-209ENST00000592885 ANO7Q6IWH7 933 aa14□□□□□ -0.17
APOC1-209ENST00000592885 GPRIN1Q7Z2K8 1008 aa14□□□□□ -0.17
APOC1-209ENST00000592885 CCDC33Q8N5R6 958 aa14□□□□□ -0.17
APOC1-209ENST00000592885 ALLCQ8N6M5 410 aa14□□□□□ -0.17
APOC1-209ENST00000592885 TERB1Q8NA31 727 aa14□□□□□ -0.17
APOC1-209ENST00000592885 SPACA7Q96KW9 195 aa14□□□□□ -0.17
APOC1-209ENST00000592885 KLF16Q9BXK1 252 aaPredicted RBP14□□□□□ -0.17
APOC1-209ENST00000592885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14□□□□□ -0.17
APOC1-209ENST00000592885 NUP205Q92621 2012 aa14□□□□□ -0.17
APOC1-209ENST00000592885 CYP26A1O43174 497 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 CACNG3O60359 315 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 GREM1O60565 184 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 TULP3O75386 442 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 IRF1P10914 325 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 CD58P19256 250 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 ACO1P21399 889 aaKnown RBP13.99□□□□□ -0.17
APOC1-209ENST00000592885 TIE1P35590 1138 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 DPP6P42658 865 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 KIF11P52732 1056 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 MESP2Q0VG99 397 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 TXNDC5Q8NBS9 432 aaKnown RBP13.99□□□□□ -0.17
APOC1-209ENST00000592885 GSDMAQ96QA5 445 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 XPO6Q96QU8 1125 aaKnown RBP13.99□□□□□ -0.17
APOC1-209ENST00000592885 TSG101Q99816 390 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 TPSD1Q9BZJ3 242 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 UBXN6Q9BZV1 441 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
APOC1-209ENST00000592885 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 CLIC5Q9NZA1 410 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 DNMT3LQ9UJW3 386 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 STARD13Q9Y3M8 1113 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 USP3Q9Y6I4 520 aa13.99□□□□□ -0.17
APOC1-209ENST00000592885 TNRC6BQ9UPQ9 1833 aaKnown RBP13.99□□□□□ -0.17
APOC1-209ENST00000592885 THADAQ6YHU6 1953 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 SGK1O00141 431 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 DCLK1O15075 740 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 SMC2O95347 1197 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 CAVIN2O95810 425 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 RALAP11233 206 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 RARGP13631 454 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 P2RY2P41231 377 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 CREB5Q02930 508 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 CCDC6Q16204 474 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 ANO4Q32M45 955 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 PPP1R26Q5T8A7 1209 aaPredicted RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 STPG1Q5TH74 334 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 ZNF658Q5TYW1 1059 aaPredicted RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 GRAMD4Q6IC98 578 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 TMEM92Q6UXU6 159 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 CYP2U1Q7Z449 544 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 TMEM25Q86YD3 366 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 ZC3H3Q8IXZ2 948 aaKnown RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 FMR1NBQ8N0W7 255 aaPredicted RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 ARHGAP18Q8N392 663 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 ZNF513Q8N8E2 541 aaPredicted RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 CISHQ9NSE2 258 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 HOOK1Q9UJC3 728 aaKnown RBP13.98□□□□□ -0.17
APOC1-209ENST00000592885 ZNF510Q9Y2H8 683 aa13.98□□□□□ -0.17
APOC1-209ENST00000592885 A0A1W2PQH9 124 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 TM4SF5O14894 197 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 ADAM23O75077 832 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 PGFP49763 221 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 SLC8A3P57103 927 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
APOC1-209ENST00000592885 FKBP3Q00688 224 aaKnown RBP13.97□□□□□ -0.17
APOC1-209ENST00000592885 PNOCQ13519 176 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 BECN1Q14457 450 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 C10orf120Q5SQS8 335 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 C10orf76Q5T2E6 689 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 RNF43Q68DV7 783 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 ARHGAP17Q68EM7 881 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 Q6ZNB5 142 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 SFTPA1Q8IWL2 248 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 SPATA20Q8TB22 786 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 WBP2Q969T9 261 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 JAKMIP2Q96AA8 810 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 TMEM176AQ96HP8 235 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 EDEM2Q9BV94 578 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms