RNA–Protein interactions for RNA: ENST00000592737.5

NCLN-208, Transcript of nicalin, humanhuman

TSL 3

Gene NCLN, Length 2,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-208ENST00000592737 PTPN20Q4JDL3 420 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 C16orf46Q6P387 395 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 HAPLN3Q96S86 360 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 C1orf21Q9H246 121 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 SDR42E2A6NKP2 422 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 LDHAP00338 332 aaKnown RBP17.7■□□□□ 0.42
NCLN-208ENST00000592737 BPGMP07738 259 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 RAG1P15918 1043 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 NCF2P19878 526 aaPredicted RBP17.7■□□□□ 0.42
NCLN-208ENST00000592737 MIPP30301 263 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 CPOXP36551 454 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 CDH6P55285 790 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 ORC1Q13415 861 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 MSLNQ13421 630 aaPredicted RBP17.7■□□□□ 0.42
NCLN-208ENST00000592737 TRPC3Q13507 836 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 PEX6Q13608 980 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 RNF111Q6ZNA4 994 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 ICA1LQ8NDH6 482 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 STKLD1Q8NE28 680 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 SMYD2Q9NRG4 433 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 HEY1Q9Y5J3 304 aa17.7■□□□□ 0.42
NCLN-208ENST00000592737 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 PLA2G6O60733 806 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 PABPC4LP0CB38 370 aaKnown RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 CSH1P0DML2 217 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 CSH2P0DML3 217 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 RPL10AP62906 217 aaKnown RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 HNRNPDQ14103 355 aaKnown RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 SLFN12LQ6IEE8 588 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 GCNAQ96QF7 691 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 PXMP2Q9NR77 195 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 THAP1Q9NVV9 213 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 ITM2AO43736 263 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 PSAPP07602 524 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 TNFSF9P41273 254 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 DEUP1Q05D60 604 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 WASHC5Q12768 1159 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 CCNIQ14094 377 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 EMC2Q15006 297 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 FASTKD1Q53R41 847 aaKnown RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 ZNF518BQ9C0D4 1074 aa17.69■□□□□ 0.42
NCLN-208ENST00000592737 NXF1Q9UBU9 619 aaKnown RBP17.69■□□□□ 0.42
NCLN-208ENST00000592737 ZMPSTE24O75844 475 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
NCLN-208ENST00000592737 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
NCLN-208ENST00000592737 DPH6Q7L8W6 267 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
NCLN-208ENST00000592737 DEFB107AQ8IZN7 70 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 DEPDC1BQ8WUY9 529 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 DNAJC1Q96KC8 554 aaKnown RBP17.68■□□□□ 0.42
NCLN-208ENST00000592737 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 IFT122Q9HBG6 1241 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■□□□□ 10.7
NCLN-208ENST00000592737 USP18Q9UMW8 372 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 SRCAPQ6ZRS2 3230 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 CHADO15335 359 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 AOC1P19801 751 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 KCNA4P22459 653 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 CHN2P52757 468 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 SMAD1Q15797 465 aaKnown RBP17.68■□□□□ 0.42
NCLN-208ENST00000592737 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 PREBQ9HCU5 417 aa17.68■□□□□ 0.42
NCLN-208ENST00000592737 HNRNPRO43390 633 aaKnown RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 DKC1O60832 514 aaKnown RBP eCLIP17.67■□□□□ 0.42
NCLN-208ENST00000592737 SNNO75324 88 aaPredicted RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 KLHL2O95198 593 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 ASS1P00966 412 aaKnown RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 FOLH1Q04609 750 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 CDO1Q16878 200 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 TRMT10BQ6PF06 316 aaKnown RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 ADGRG6Q86SQ4 1221 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 PIWIL2Q8TC59 973 aaKnown RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 NIF3L1Q9GZT8 377 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 RSAD1Q9HA92 442 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 ZDHHC7Q9NXF8 308 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 LMCD1Q9NZU5 365 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 CNTNAP2Q9UHC6 1331 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 PIK3R2O00459 728 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 APOEP02649 317 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 USP46P62068 366 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 TFAMQ00059 246 aaKnown RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 MAP3K21Q5TCX8 1036 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 SDCCAG8Q86SQ7 713 aaPredicted RBP17.67■□□□□ 0.42
NCLN-208ENST00000592737 ITFG2Q969R8 447 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 PNPLA8Q9NP80 782 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 CYTH4Q9UIA0 394 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 CDH22Q9UJ99 828 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 ZNF180Q9UJW8 692 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 PACSIN3Q9UKS6 424 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 SCN9AQ15858 1988 aa17.67■□□□□ 0.42
NCLN-208ENST00000592737 C15orf38-AP3S2A0A0A6YYH1 394 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms