RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 ZC3H7BQ9UGR2 993 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 SLC7A8Q9UHI5 535 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 BIRC5O15392 142 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 SERPINA6P08185 405 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 AP2B1P63010 937 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 TMCO4Q5TGY1 634 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CYP4V2Q6ZWL3 525 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CRLF3Q8IUI8 442 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 CCDC28BQ9BUN5 200 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 RAB6BQ9NRW1 208 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 SORCS3Q9UPU3 1222 aa15.43■□□□□ 0.06
SMARCA4-219ENST00000592604 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 RAB27AP51159 221 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 AQP5P55064 265 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 WASHC5Q12768 1159 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 RFX8Q6ZV50 586 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 CAND1Q86VP6 1230 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 LRRC39Q96DD0 335 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 BCO2Q9BYV7 579 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 SDCBP2Q9H190 292 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ASCC2Q9H1I8 757 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 SMYD2Q9NRG4 433 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF232Q9UNY5 417 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 H7C0C1 242 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 AP1G2O75843 785 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 KRT38O76015 456 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 APOEP02649 317 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 BPGMP07738 259 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 CRHR1P34998 444 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ATP5OP48047 213 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF143P52747 638 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 CDH6P55285 790 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 TFAMQ00059 246 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 KDSRQ06136 332 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 MFSD4BQ5TF39 518 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ADGRG6Q86SQ4 1221 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 RNF157Q96PX1 679 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 THTPAQ9BU02 230 aa15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF395Q9H8N7 513 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 HBS1LQ9Y450 684 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-219ENST00000592604 CYB561D2O14569 222 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 MAFO75444 373 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 LYNP07948 512 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 OSBPP22059 807 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 HIRAP54198 1017 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 DSG1Q02413 1049 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SYCP2LQ5T4T6 812 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 PRPF31Q8WWY3 499 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 FGD4Q96M96 766 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 TSPAN18Q96SJ8 248 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 ECSITQ9BQ95 431 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 C20orf27Q9GZN8 174 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 MAF1Q9H063 256 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 NRBP2Q9NSY0 501 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 NDE1Q9NXR1 346 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SCAF8Q9UPN6 1271 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SDR42E2A6NKP2 422 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 B4GALT4O60513 344 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 FKBP6O75344 327 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 BACE1P56817 501 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 ARCQ7LC44 396 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SESTD1Q86VW0 696 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 MCUQ8NE86 351 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 CLPTM1LQ96KA5 538 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 PCYT2Q99447 389 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 ANK1P16157 1881 aa15.41■□□□□ 0.06
SMARCA4-219ENST00000592604 SLC15A5A6NIM6 579 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 PRR5-ARHGAP8B1AHC4 643 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 TNNC2P02585 160 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 AOC1P19801 751 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 ARHGAP8P85298 464 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 DBN1Q16643 649 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 AAGABQ6PD74 315 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 IZUMO2Q6UXV1 221 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 PLD5Q8N7P1 536 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 SIKE1Q9BRV8 207 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 CNPY3Q9BT09 278 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 MGAMO43451 1857 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 HMX2A2RU54 273 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 CPOXP36551 454 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 ANKRD36BP1Q96IX9 119 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 KLC2Q9H0B6 622 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 ACAD9Q9H845 621 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 QTRT2Q9H974 415 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 ZNF277Q9NRM2 450 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 ETNK2Q9NVF9 386 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 THAP1Q9NVV9 213 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 LCTP09848 1927 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 BCLAF3A2AJT9 711 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
SMARCA4-219ENST00000592604 KCNN4O15554 427 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms