RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 DUSP9Q99956 384 aaKnown RBP20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 MED10Q9BTT4 135 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 PANK2Q9BZ23 570 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 ZDHHC5Q9C0B5 715 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 SLC6A17Q9H1V8 727 aa20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 NXF1Q9UBU9 619 aaKnown RBP20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 FBXO2Q9UK22 296 aaPredicted RBP20.8■□□□□ 0.92
PRKCSH-216ENST00000592445 SMG1Q96Q15 3661 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 TRPC3Q13507 836 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 SNX30Q5VWJ9 437 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 CCDC65Q8IXS2 484 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 MDM1Q8TC05 714 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 SETD7Q8WTS6 366 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 HNRNPLLQ8WVV9 542 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 CCDC127Q96BQ5 260 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 MRGPRX1Q96LB2 322 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 BBS2Q9BXC9 721 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 CD93Q9NPY3 652 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 GMIPQ9P107 970 aa20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 SRPRBQ9Y5M8 271 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-216ENST00000592445 IGSF10Q6WRI0 2623 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 GCN1Q92616 2671 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 MEI4A8MW99 385 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 CLSTN1O94985 981 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 TYRP14679 529 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 SLC5A3P53794 718 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 SNRNP35Q16560 246 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 TPGS1Q6ZTW0 290 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 TOGARAM2Q6ZUX3 1019 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 CD248Q9HCU0 757 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 DMAP1Q9NPF5 467 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 CACNA2D2Q9NY47 1150 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 WDR35Q9P2L0 1181 aa20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-216ENST00000592445 EIF4E1BA6NMX2 242 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 PRRT4C9JH25 899 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 CACNG3O60359 315 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 CD6P30203 668 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 SLCO6A1Q86UG4 719 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 FAM35AQ86V20 835 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 GLIS3Q8NEA6 775 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 HPS3Q969F9 1004 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 CGRRF1Q99675 332 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 MIR1-1HGQ9H1L0 117 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 PCOLCE2Q9UKZ9 415 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 RAXQ9Y2V3 346 aa20.77■□□□□ 0.92
PRKCSH-216ENST00000592445 CELSR3Q9NYQ7 3312 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 A0A1B0GTW7 788 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 VPS37CA5D8V6 355 aaPredicted RBP20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 TLR5O60602 858 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 ZDHHC11BP0C7U3 371 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 DGKGP49619 791 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 MYL6P60660 151 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 GOLGA8FQ08AF8 430 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 GOLGA8DPQ0D2H9 430 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 HTR3DQ70Z44 454 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 GLRX5Q86SX6 157 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 ZCCHC9Q8N567 271 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 SMARCD1Q96GM5 515 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 TOE1Q96GM8 510 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 COMMD8Q9NX08 183 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 IL37Q9NZH6 218 aa20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 LSM7Q9UK45 103 aaKnown RBP20.76■□□□□ 0.91
PRKCSH-216ENST00000592445 WASH3PC4AMC7 463 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 GFRA2O00451 464 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 CBFA2T3O75081 653 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 PHACTR2O75167 634 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 NCAM1P13591 858 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 CEBPZQ03701 1054 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 CYP24A1Q07973 514 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 STARD3Q14849 445 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 PSMD6Q15008 389 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 BHMTQ93088 406 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 LRIG1Q96JA1 1093 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 GPR174Q9BXC1 333 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■■□□ 17.5
PRKCSH-216ENST00000592445 KRT82Q9NSB4 513 aa20.75■□□□□ 0.91
PRKCSH-216ENST00000592445 AP1G2O75843 785 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 CD2BP2O95400 341 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 STAU1O95793 577 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 TBX18O95935 607 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 ATICP31939 592 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 HOXD13P35453 343 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 CYP2J2P51589 502 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 CDH8P55286 799 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 DNASE2BQ8WZ79 361 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 TNIP3Q96KP6 325 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 FBXO44Q9H4M3 255 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 GAREM1Q9H706 876 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 SMYD3Q9H7B4 428 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 PRDM16Q9HAZ2 1276 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 IL21RQ9HBE5 538 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 TLR8Q9NR97 1041 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 MARK1Q9P0L2 795 aa20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 KIAA1522Q9P206 1035 aaPredicted RBP20.74■□□□□ 0.91
PRKCSH-216ENST00000592445 A0A087X0B3 334 aa20.73■□□□□ 0.91
PRKCSH-216ENST00000592445 FAM92AA1XBS5 289 aa20.73■□□□□ 0.91
PRKCSH-216ENST00000592445 CER1O95813 267 aa20.73■□□□□ 0.91
PRKCSH-216ENST00000592445 PGFP49763 221 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms