RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TBC1D3BA6NDS4 549 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 HHLA1C9JL84 531 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 SGK1O00141 431 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 GREM1O60565 184 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 TULP3O75386 442 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 TIE1P35590 1138 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 P2RY2P41231 377 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 PLA2G4AP47712 749 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 PPP3CAQ08209 521 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 ZCWPW2Q504Y3 356 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 RNF43Q68DV7 783 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 SPOPLQ6IQ16 392 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 CCDC186Q7Z3E2 898 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 TERB1Q8NA31 727 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 TAS1R2Q8TE23 839 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 CNTNAP3BQ96NU0 1288 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 XPO6Q96QU8 1125 aaKnown RBP19.9■□□□□ 0.78
CCDC43-205ENST00000592333 CNTNAP3Q9BZ76 1288 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 UBXN6Q9BZV1 441 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 ACACBO00763 2458 aa19.9■□□□□ 0.78
CCDC43-205ENST00000592333 KHNYNO15037 678 aaKnown RBP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 CACNG3O60359 315 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 ZNF202O95125 648 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 TPRP12270 2363 aaKnown RBP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 GCLMP48507 274 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 KIF11P52732 1056 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 MESP2Q0VG99 397 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 CCDC6Q16204 474 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 LPCAT2Q7L5N7 544 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 TMEM25Q86YD3 366 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 DUSP16Q9BY84 665 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 GTPBP4Q9BZE4 634 aaKnown RBP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 TPSD1Q9BZJ3 242 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 APOBEC3GQ9HC16 384 aaKnown RBP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 RXFP3Q9NSD7 469 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 CLIC5Q9NZA1 410 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 EVLQ9UI08 416 aaPredicted RBP19.89■□□□□ 0.77
CCDC43-205ENST00000592333 DNMT3LQ9UJW3 386 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 ZNF510Q9Y2H8 683 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 USP3Q9Y6I4 520 aa19.89■□□□□ 0.77
CCDC43-205ENST00000592333 ADAM23O75077 832 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 PRR29P0C7W0 189 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 ACO1P21399 889 aaKnown RBP19.88■□□□□ 0.77
CCDC43-205ENST00000592333 ADORA2BP29275 332 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 HOXD12P35452 270 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 ANO4Q32M45 955 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 COBLL1Q53SF7 1204 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 DAB2IPQ5VWQ8 1189 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 CYP2U1Q7Z449 544 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 ZNF513Q8N8E2 541 aaPredicted RBP19.88■□□□□ 0.77
CCDC43-205ENST00000592333 FBXL13Q8NEE6 735 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 TWNKQ96RR1 684 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 EDEM2Q9BV94 578 aa19.88■□□□□ 0.77
CCDC43-205ENST00000592333 CNOT1A5YKK6 2376 aaKnown RBP19.87■□□□□ 0.77
CCDC43-205ENST00000592333 EPG5Q9HCE0 2579 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 SCAMP3O14828 347 aaKnown RBP19.87■□□□□ 0.77
CCDC43-205ENST00000592333 TRIM49P0CI25 452 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 TRIM49CP0CI26 452 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 RALAP11233 206 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 HNRNPLP14866 589 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC43-205ENST00000592333 SHC2P98077 582 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 KDSRQ06136 332 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 ORC1Q13415 861 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 EMC10Q5UCC4 262 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 GRAMD4Q6IC98 578 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 ELMO3Q96BJ8 720 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 RMND1Q9NWS8 449 aa19.87■□□□□ 0.77
CCDC43-205ENST00000592333 BCCIPQ9P287 314 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC43-205ENST00000592333 LNP1A1A4G5 178 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 GFRA2O00451 464 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 CETN3O15182 167 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 ZBTB24O43167 697 aaPredicted RBP19.86■□□□□ 0.77
CCDC43-205ENST00000592333 RARGP13631 454 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 NTSR1P30989 418 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 PGFP49763 221 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 SLC8A3P57103 927 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 COG7P83436 770 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 LMAN2Q12907 356 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 E2F5Q15329 346 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 MAP7D1Q3KQU3 841 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 C10orf76Q5T2E6 689 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 SDE2Q6IQ49 451 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 SLC36A4Q6YBV0 504 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 GPRIN1Q7Z2K8 1008 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 SFTPA1Q8IWL2 248 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 ARHGAP18Q8N392 663 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 NAT16Q8N8M0 369 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 BBS2Q9BXC9 721 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 SMOC1Q9H4F8 434 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 OSER1Q9NX31 292 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 RAB20Q9NX57 234 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 MAPK8IP1Q9UQF2 711 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 MYOFQ9NZM1 2061 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 MYH10P35580 1976 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 PLXND1Q9Y4D7 1925 aa19.86■□□□□ 0.77
CCDC43-205ENST00000592333 NUP205Q92621 2012 aa19.85■□□□□ 0.77
CCDC43-205ENST00000592333 ANTXRLA6NF34 631 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms