RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TLE6Q9H808 572 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 IPPKQ9H8X2 491 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 AASDHPPTQ9NRN7 309 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 TBC1D13Q9NVG8 400 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 SPG21Q9NZD8 308 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 DNAJB4Q9UDY4 337 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 CD207Q9UJ71 328 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 PCDHB2Q9Y5E7 798 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 SNX11Q9Y5W9 270 aa8.27□□□□□ -1.09
VMP1-213ENST00000591877 TSPAN1O60635 241 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 DDHD2O94830 711 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 GALTP07902 379 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 OR52Z1P0C646 297 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 C1QTNF9P0C862 333 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 XRCC6P12956 609 aaKnown RBP eCLIP8.26□□□□□ -1.098e-25■■■□□ 15.3
VMP1-213ENST00000591877 U2AF2P26368 475 aaKnown RBP eCLIP8.26□□□□□ -1.094e-26■■■■□ 19.9
VMP1-213ENST00000591877 PPM1AP35813 382 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 GNALP38405 381 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 MBTD1Q05BQ5 628 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 POU5F1BQ06416 359 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 COASYQ13057 564 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 SMAD4Q13485 552 aaKnown RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 MXD4Q14582 209 aaPredicted RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 CRY1Q16526 586 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 NOMO2Q5JPE7 1267 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TTC38Q5R3I4 469 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 MBLAC2Q68D91 279 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TMEM184AQ6ZMB5 413 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 NOSTRINQ8IVI9 506 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 ADHFE1Q8IWW8 467 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TCEAL8Q8IYN2 117 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 NAT16Q8N8M0 369 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 SMRP1Q8NCR6 262 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 PPP2R3CQ969Q6 453 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 CPB2Q96IY4 423 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TCF25Q9BQ70 676 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 LRFN3Q9BTN0 628 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 POLR3CQ9BUI4 534 aaPredicted RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 CDADC1Q9BWV3 514 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 VN1R3Q9BXE9 311 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 C1QTNF1Q9BXJ1 281 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 EIF2AQ9BY44 585 aaKnown RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 MRPL9Q9BYD2 267 aaKnown RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 CDIP1Q9H305 208 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TCF7L1Q9HCS4 588 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TUFT1Q9NNX1 390 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 THG1LQ9NWX6 298 aaKnown RBP8.26□□□□□ -1.09
VMP1-213ENST00000591877 DUSP13Q9UII6 198 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 ZNF281Q9Y2X9 895 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TRIP11Q15643 1979 aa8.26□□□□□ -1.09
VMP1-213ENST00000591877 TMEM82A0PJX8 343 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 GOLGA6CA6NDK9 693 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 GOLGA6BA6NDN3 693 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 H7BY64 318 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 B4GALT5O43286 388 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 USO1O60763 962 aaKnown RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 ZC3H11AO75152 810 aaKnown RBP eCLIP8.25□□□□□ -1.09
VMP1-213ENST00000591877 GOLGA6DP0CG33 693 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 ARF4P18085 180 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 RPA1P27694 616 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 SLC11A1P49279 550 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 KRT17Q04695 432 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 ORC2Q13416 577 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 RABEP1Q15276 862 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 IL17AQ16552 155 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 INAVAQ3KP66 663 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 CDKAL1Q5VV42 579 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 SYCE2Q6PIF2 218 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 GLB1LQ6UWU2 654 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 PRR23BQ6ZRT6 265 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 MAEAQ7L5Y9 396 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 CDR2LQ86X02 465 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 MRPL43Q8N983 215 aaKnown RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 FAM184AQ8NB25 1140 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 CHTF18Q8WVB6 975 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 SUSD6Q92537 303 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 PGBD4Q96DM1 585 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 IGSF21Q96ID5 467 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 TMX3Q96JJ7 454 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 FCRL2Q96LA5 508 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 HSPA12BQ96MM6 686 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 CDCA3Q99618 268 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 BOCQ9BWV1 1114 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 NFKBIZQ9BYH8 718 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 ZBP1Q9H171 429 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 POLR3FQ9H1D9 316 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 S1PR5Q9H228 398 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 RSAD1Q9HA92 442 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 NGRNQ9NPE2 291 aaKnown RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 ENTPD7Q9NQZ7 604 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 SEMA3GQ9NS98 782 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 SPTLC3Q9NUV7 552 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 MIOSQ9NXC5 875 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 GOLGA6AQ9NYA3 693 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 PUF60Q9UHX1 559 aaKnown RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 DBR1Q9UK59 544 aaKnown RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 FAM50BQ9Y247 325 aa8.25□□□□□ -1.09
VMP1-213ENST00000591877 USP15Q9Y4E8 981 aaPredicted RBP8.25□□□□□ -1.09
VMP1-213ENST00000591877 HES2Q9Y543 173 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms