RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 CEP83Q9Y592 693 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
BRCA1-227ENST00000591849 ZFHX2Q9C0A1 2572 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 SLC12A8A0AV02 714 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 FOXN3O00409 490 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 PIK3R2O00459 728 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 MDM4O15151 490 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 FBXO21O94952 628 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 ADH1CP00326 375 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 GJA4P35212 333 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 ACADSBP45954 432 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 PGFP49763 221 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 ZNF165P49910 485 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 GALK1P51570 392 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 ZNF132P52740 706 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 SNX16P57768 344 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 UBXN1Q04323 297 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 PPP2R5DQ14738 602 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 DRAP1Q14919 205 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 EML3Q32P44 896 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 FILIP1LQ4L180 1135 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 RAB41Q5JT25 222 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 KLHDC7AQ5VTJ3 777 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 CDKAL1Q5VV42 579 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 PMF1Q6P1K2 205 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 DENND1BQ6P3S1 775 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 KIAA1958Q8N8K9 716 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 RIN3Q8TB24 985 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 ZNF606Q8WXB4 792 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 KCTD13Q8WZ19 329 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 SHC3Q92529 594 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 NDRG1Q92597 394 aaKnown RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 OTUB2Q96DC9 234 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 HSFY1Q96LI6 401 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 NOX5Q96PH1 765 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 P2RY13Q9BPV8 354 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 SYNCQ9H7C4 482 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 OLA1Q9NTK5 396 aaKnown RBP10.57□□□□□ -0.72
BRCA1-227ENST00000591849 OSER1Q9NX31 292 aa10.57□□□□□ -0.72
BRCA1-227ENST00000591849 SYCE3A1L190 88 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 SART1O43290 800 aaKnown RBP10.56□□□□□ -0.72
BRCA1-227ENST00000591849 RPS9P46781 194 aaKnown RBP10.56□□□□□ -0.72
BRCA1-227ENST00000591849 GAD2Q05329 585 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 KCNMA1Q12791 1236 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 TCF15Q12870 199 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 ANGPT1Q15389 498 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 DHCR24Q15392 516 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 ANO4Q32M45 955 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 BSPRYQ5W0U4 402 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 PM20D1Q6GTS8 502 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 KLHDC10Q6PID8 442 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 TXNDC11Q6PKC3 985 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 ADGRG2Q8IZP9 1017 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 NEK11Q8NG66 645 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 SLC35F5Q8WV83 523 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 IRGQQ8WZA9 623 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 EDEM1Q92611 657 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 CD101Q93033 1021 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 CLDN23Q96B33 292 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 FAM149B1Q96BN6 582 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 SPAG5Q96R06 1193 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 ZSWIM1Q9BR11 485 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 DCLK3Q9C098 648 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 SIX2Q9NPC8 291 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 CNGB3Q9NQW8 809 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 ABCC13Q9NSE7 274 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-227ENST00000591849 RBM12Q9NTZ6 932 aaKnown RBP10.56□□□□□ -0.72
BRCA1-227ENST00000591849 MARCH2Q9P0N8 246 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 LIMA1Q9UHB6 759 aaKnown RBP10.56□□□□□ -0.72
BRCA1-227ENST00000591849 FHOD1Q9Y613 1164 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 MYO15AQ9UKN7 3530 aa10.56□□□□□ -0.72
BRCA1-227ENST00000591849 GOLGA6L19H0YKK7 550 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 TRDMT1O14717 391 aaKnown RBP10.55□□□□□ -0.72
BRCA1-227ENST00000591849 CAPN9O14815 690 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 LTFP02788 710 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 CHRNB1P11230 501 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 ADH5P11766 374 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 UCHL3P15374 230 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 DRD1P21728 446 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 GPD2P43304 727 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 DAOAP59103 153 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 POLR2FP61218 127 aaKnown RBP10.55□□□□□ -0.72
BRCA1-227ENST00000591849 ZXDBP98169 803 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 CSTF1Q05048 431 aaKnown RBP10.55□□□□□ -0.72
BRCA1-227ENST00000591849 SYCP1Q15431 976 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 PREPLQ4J6C6 727 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-227ENST00000591849 LY6G5CQ5SRR4 150 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 NUDT18Q6ZVK8 323 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 PASD1Q8IV76 773 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 BBS7Q8IWZ6 715 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
BRCA1-227ENST00000591849 ZNF276Q8N554 614 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms