RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 SV2AQ7L0J3 742 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 ARMCX6Q7L4S7 300 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 TMEFF1Q8IYR6 380 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 FRMD1Q8N878 549 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 ZNF513Q8N8E2 541 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-230ENST00000591055 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 MBD1Q9UIS9 605 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-230ENST00000591055 FRMD4BQ9Y2L6 1034 aa16.64■□□□□ 0.25
CIRBP-230ENST00000591055 CFAP47Q6ZTR5 3102 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 A0A1B0GVL5 298 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 CDX4O14627 284 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-230ENST00000591055 GIPC1O14908 333 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 IKBKBO14920 756 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 CALUO43852 315 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-230ENST00000591055 TBX18O95935 607 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 HLA-DRAP01903 254 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 FAM200BP0CF97 657 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 ADORA2BP29275 332 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 ASPAP45381 313 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 TRIM61Q5EBN2 209 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 C10orf76Q5T2E6 689 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 GRAMD4Q6IC98 578 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 HTR3DQ70Z44 454 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 KLF16Q9BXK1 252 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-230ENST00000591055 USP25Q9UHP3 1055 aa16.63■□□□□ 0.25
CIRBP-230ENST00000591055 EVLQ9UI08 416 aaPredicted RBP16.63■□□□□ 0.25
CIRBP-230ENST00000591055 PLXND1Q9Y4D7 1925 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 TRIM24O15164 1050 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 MYL1P05976 194 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 PFKFB1P16118 471 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 CMA1P23946 247 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 ATP5C1P36542 298 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 PTGER3P43115 390 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 LMAN2Q12907 356 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 UAP1L1Q3KQV9 507 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 SPDYCQ5MJ68 293 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 C1orf220Q5T0J3 134 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 LYSMD4Q5XG99 296 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 SYT12Q8IV01 421 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 JAKMIP2Q96AA8 810 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 XPO6Q96QU8 1125 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 HNRNPABQ99729 332 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 NUSAP1Q9BXS6 441 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 CYLDQ9NQC7 956 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.62■□□□□ 0.254e-7■■■■■ 57
CIRBP-230ENST00000591055 DNAJC17Q9NVM6 304 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 LSM7Q9UK45 103 aaKnown RBP16.62■□□□□ 0.25
CIRBP-230ENST00000591055 SCML2Q9UQR0 700 aa16.62■□□□□ 0.25
CIRBP-230ENST00000591055 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 ZBTB24O43167 697 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CYP26A1O43174 497 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 GREM1O60565 184 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 KIF20AO95235 890 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 HOXB2P14652 356 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CSRP1P21291 193 aaKnown RBP16.61■□□□□ 0.25
CIRBP-230ENST00000591055 NTSR1P30989 418 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 DPP6P42658 865 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 WASP42768 502 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 VAMP7P51809 220 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 INCA1Q0VD86 236 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CLEC20AQ6ZU45 233 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 GPRIN1Q7Z2K8 1008 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CCDC47Q96A33 483 aaKnown RBP16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 TWNKQ96RR1 684 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 BBS2Q9BXC9 721 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 NT5C1AQ9BXI3 368 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 WDR35Q9P2L0 1181 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 TRAF3IP3Q9Y228 551 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 STARD13Q9Y3M8 1113 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 PCDHA5Q9Y5H7 936 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 CACNA1EQ15878 2313 aa16.61■□□□□ 0.25
CIRBP-230ENST00000591055 IGF2RP11717 2491 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 HHLA1C9JL84 531 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 MAPK13O15264 365 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 AP5Z1O43299 807 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 CACNG3O60359 315 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 TRIM49P0CI25 452 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 TRIM49CP0CI26 452 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 RARGP13631 454 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 CEACAM1P13688 526 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 TYRP14679 529 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 GABRG2P18507 467 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 ACO1P21399 889 aaKnown RBP16.6■□□□□ 0.25
CIRBP-230ENST00000591055 EGFLAMQ63HQ2 1017 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 SDE2Q6IQ49 451 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 SLC36A4Q6YBV0 504 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 MIB1Q86YT6 1006 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 NMUR1Q9HB89 426 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 TMEM74BQ9NUR3 256 aa16.6■□□□□ 0.25
CIRBP-230ENST00000591055 OSER1Q9NX31 292 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms