RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SRGAP2BP0DMP2 458 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CTSAP10619 480 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CPB1P15086 417 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MAGEA10P43363 369 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 NOP2P46087 812 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 GABRB2P47870 512 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 NDUFV1P49821 464 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 AFF1P51825 1210 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 GALCP54803 685 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 ETF1P62495 437 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 NOMO3P69849 1222 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 DEFB103AP81534 67 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CYP27A1Q02318 531 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 APBA1Q02410 837 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 PIGHQ14442 188 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 VEPH1Q14D04 833 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 PSMD5Q16401 504 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 PTPN21Q16825 1174 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 PTPROQ16827 1216 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 GOLGA7BQ2TAP0 167 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 TAF3Q5VWG9 929 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 NAA35Q5VZE5 725 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 SLC8B1Q6J4K2 584 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 DNAJC24Q6P3W2 148 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 DCUN1D2Q6PH85 259 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CCDC149Q6ZUS6 474 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 BTLAQ7Z6A9 289 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 TMEM110Q86TL2 294 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 ITIH5Q86UX2 942 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CEP57Q86XR8 500 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MCOLN2Q8IZK6 566 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 C3orf20Q8ND61 904 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF461Q8TAF7 563 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 FNIP1Q8TF40 1166 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 HDAC7Q8WUI4 952 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 SPATA17Q96L03 361 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF830Q96NB3 372 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CSNK1G1Q9HCP0 422 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 NEUROD4Q9HD90 331 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CNGB3Q9NQW8 809 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 CTTNBP2NLQ9P2B4 639 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MTRRQ9UBK8 725 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 RNF14Q9UBS8 474 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 DNAJB4Q9UDY4 337 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 AFF4Q9UHB7 1163 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 IP6K2Q9UHH9 426 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 TSPAN16Q9UKR8 245 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 JRKLQ9Y4A0 524 aa7.7□□□□□ -1.18
SMAD4-210ENST00000590061 MRPL42Q9Y6G3 142 aaKnown RBP7.7□□□□□ -1.18
SMAD4-210ENST00000590061 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 CTAGE9A4FU28 777 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SIGLEC16A6NMB1 481 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 TGFBR3LH3BV60 316 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PPEF2O14830 753 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 NCK2O43639 380 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 HSF2BPO75031 334 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF189O75820 626 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RNF8O76064 485 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 FGF18O76093 207 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 EFEMP2O95967 443 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 F9P00740 461 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 KRT3P12035 628 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SYN1P17600 705 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 CHRNB2P17787 502 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 MAN1A1P33908 653 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 CTNNB1P35222 781 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 GPD2P43304 727 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RAP1GAPP47736 663 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ALDH1A3P47895 512 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RPL34P49207 117 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 KPNA1P52294 538 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PSMC1P62191 440 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PDCLQ13371 301 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RAB33AQ14088 237 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 TAF12Q16514 161 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PABPC1LQ4VXU2 614 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ODF2Q5BJF6 829 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 MDH1BQ5I0G3 518 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 DNTTIP2Q5QJE6 756 aaKnown RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 E4F1Q66K89 784 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RNF168Q8IYW5 571 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 VPS52Q8N1B4 723 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ELMOD1Q8N336 334 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 UBL4BQ8N7F7 174 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 LEMD2Q8NC56 503 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 PDZD8Q8NEN9 1154 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SLC2A14Q8TDB8 520 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SLC20A1Q8WUM9 679 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 SLC35F5Q8WV83 523 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 RIN2Q8WYP3 895 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 OVCA2Q8WZ82 227 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 VWCEQ96DN2 955 aa7.69□□□□□ -1.18
SMAD4-210ENST00000590061 NAP1L3Q99457 506 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-210ENST00000590061 CDCA3Q99618 268 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms