RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CCT8L2Q96SF2 557 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 RBM15Q96T37 977 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS25-202ENST00000589219 FAM118BQ9BPY3 351 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 ZNF670Q9BS34 389 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 COL25A1Q9BXS0 654 aaPredicted RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 NSRP1Q9H0G5 558 aaKnown RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 ADAM7Q9H2U9 754 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 SNX25Q9H3E2 840 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 SLC4A7Q9Y6M7 1214 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 SMIM28A0A1B0GU29 152 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 GRXCR1A8MXD5 290 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PPEF2O14830 753 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 TREHO43280 583 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 KIAA0754O94854 1291 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CHN1P15882 459 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PECAM1P16284 738 aaPredicted RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 LRPAP1P30533 357 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PBX2P40425 430 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 SLCO1A2P46721 670 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 RPL34P49207 117 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 RGS7P49802 495 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CDH6P55285 790 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 ARL4CP56559 192 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CORO7P57737 925 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 EIF3EP60228 445 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 DYNLT1P63172 113 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PLCB3Q01970 1234 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 BFSP2Q13515 415 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 RASA2Q15283 850 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 KYNUQ16719 465 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 LONRF1Q17RB8 773 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 KCNT1Q5JUK3 1230 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 GLRA4Q5JXX5 417 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 YTHDF3Q7Z739 585 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 RSPH3Q86UC2 560 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CRYBG2Q8N1P7 616 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 C7orf31Q8N865 590 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 ANKRD52Q8NB46 1076 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 UHMK1Q8TAS1 419 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 SLC35F5Q8WV83 523 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 ATXN2LQ8WWM7 1075 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 C18orf25Q96B23 403 aaPredicted RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 CHMP6Q96FZ7 201 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PEBP4Q96S96 227 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 TMEM121Q9BTD3 319 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 APOL6Q9BWW8 343 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CALN1Q9BXU9 219 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 MAK16Q9BXY0 300 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 SLC28A3Q9HAS3 691 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CDHR5Q9HBB8 845 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 LRRC4CQ9HCJ2 640 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 SAYSD1Q9NPB0 183 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PPANQ9NQ55 473 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS25-202ENST00000589219 TRMT13Q9NUP7 481 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 INTS9Q9NV88 658 aaKnown RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 SLC38A7Q9NVC3 462 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 SENP1Q9P0U3 644 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
VPS25-202ENST00000589219 FETUBQ9UGM5 382 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 PCSK1NQ9UHG2 260 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 IPPQ9Y573 584 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
VPS25-202ENST00000589219 TRIP12Q14669 1992 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 ZBBXA8MT70 800 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 ALOX15BO15296 676 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 PAPSS1O43252 624 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 HUS1O60921 280 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 ZNF189O75820 626 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 IFNB1P01574 187 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 ZFXP17010 805 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 STIP1P31948 543 aaKnown RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 PHBP35232 272 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 SLC8A3P57103 927 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 IFI35P80217 286 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 MRPS6P82932 125 aaKnown RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 PDE4CQ08493 712 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 DPYSL3Q14195 570 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 SCN5AQ14524 2016 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 HIC1Q14526 733 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 HIF1AQ16665 826 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 CCDC142Q17RM4 750 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 SKIDA1Q1XH10 827 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 SOWAHAQ2M3V2 549 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 CCDC14Q49A88 953 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 TRNP1Q6NT89 227 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 C4orf22Q6V702 233 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 CYP4V2Q6ZWL3 525 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 CDKL3Q8IVW4 592 aaPredicted RBP10.37□□□□□ -0.75
VPS25-202ENST00000589219 ADGRF2Q8IZF7 708 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 C12orf29Q8N999 325 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 ATP11CQ8NB49 1132 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 GLIS1Q8NBF1 620 aa10.37□□□□□ -0.75
VPS25-202ENST00000589219 APPL2Q8NEU8 664 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms