RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 SEL1LQ9UBV2 794 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 FNDC3AQ9Y2H6 1198 aaKnown RBP23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 PCDHB13Q9Y5F0 798 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 CLDN5O00501 218 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 BCAT2O15382 392 aaPredicted RBP23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 PPP1R37O75864 691 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 PTPN1P18031 435 aaKnown RBP23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 LONP1P36776 959 aaKnown RBP23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 DUOXA2Q1HG44 320 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 HLA-BQ31612 363 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 SCUBE3Q8IX30 993 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 GPD1LQ8N335 351 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 OR5B17Q8NGF7 314 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 ZFRQ96KR1 1074 aaKnown RBP23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 GABRG3Q99928 467 aa23.1■■□□□ 1.29
CAPNS1-205ENST00000588780 FLRT2O43155 660 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 CLSTN1O94985 981 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 TYRP14679 529 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 GAP43P17677 238 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 SUZ12Q15022 739 aaKnown RBP23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 DCAF12L1Q5VU92 463 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 LIMS2Q7Z4I7 341 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 OVCA2Q8WZ82 227 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 SLC39A7Q92504 469 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 MED10Q9BTT4 135 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 WDR35Q9P2L0 1181 aa23.09■■□□□ 1.29
CAPNS1-205ENST00000588780 A0A087WV48 116 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 WASH3PC4AMC7 463 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 PRRT4C9JH25 899 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 ZNF883P0CG24 379 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 IDEP14735 1019 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 DGKGP49619 791 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 TNNC1P63316 161 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 GRIN1Q05586 938 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 PDCD7Q8N8D1 485 aaKnown RBP23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 DNASE2BQ8WZ79 361 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 SNX19Q92543 992 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 BHMTQ93088 406 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 WBP2Q969T9 261 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 DPEP3Q9H4B8 488 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 TMEM30AQ9NV96 361 aa23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.08■■□□□ 1.29
CAPNS1-205ENST00000588780 ATP8B3O60423 1300 aa23.08■■□□□ 1.28
CAPNS1-205ENST00000588780 PTPRJQ12913 1337 aa23.08■■□□□ 1.28
CAPNS1-205ENST00000588780 ZNF233A6NK53 670 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 A8MXQ7 604 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 SURF1Q15526 300 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 SCAMP5Q8TAC9 235 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 STRA6Q9BX79 667 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 B3GNT5Q9BYG0 378 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 CD248Q9HCU0 757 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 TOR4AQ9NXH8 423 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 WSB2Q9NYS7 404 aaPredicted RBP23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 GMIPQ9P107 970 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 EIF2B4Q9UI10 523 aaKnown RBP23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 LSM7Q9UK45 103 aaKnown RBP23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 CELSR3Q9NYQ7 3312 aa23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 ASH1LQ9NR48 2969 aaKnown RBP23.07■■□□□ 1.28
CAPNS1-205ENST00000588780 GFRA2O00451 464 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 CACNG3O60359 315 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 GOLGA8FQ08AF8 430 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 GOLGA8DPQ0D2H9 430 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 B3GALNT2Q8NCR0 500 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 ENGASEQ8NFI3 743 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 CADM4Q8NFZ8 388 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 KCNK16Q96T55 309 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.06■■□□□ 1.281e-21■■■■■ 79.2
CAPNS1-205ENST00000588780 CCDC39Q9UFE4 941 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 NFE2L3Q9Y4A8 694 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 STON1Q9Y6Q2 735 aa23.06■■□□□ 1.28
CAPNS1-205ENST00000588780 A0A1B0GVT2 93 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 SYNCRIPO60506 623 aaKnown RBP23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 BMP15O95972 392 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 ACADMP11310 421 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 OXTRP30559 389 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 CASP5P51878 434 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 ALCAMQ13740 583 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 WDR72Q3MJ13 1102 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 FUT11Q495W5 492 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 CACUL1Q86Y37 369 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 BTBD3Q9Y2F9 522 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 NME7Q9Y5B8 376 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 PCDHGB2Q9Y5G2 931 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 SHROOM3Q8TF72 1996 aa23.05■■□□□ 1.28
CAPNS1-205ENST00000588780 TACC1O75410 805 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 DLATP10515 647 aaKnown RBP23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 TUBP50607 506 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 SLC5A3P53794 718 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 LRRC69Q6ZNQ3 347 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 SV2BQ7L1I2 683 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 TRAPPC11Q7Z392 1133 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 CBWD2Q8IUF1 395 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 BAHD1Q8TBE0 780 aaPredicted RBP23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 SIPA1Q96FS4 1042 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 ITM2CQ9NQX7 267 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 PLK2Q9NYY3 685 aa23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 NXF1Q9UBU9 619 aaKnown RBP23.04■■□□□ 1.28
CAPNS1-205ENST00000588780 METTL12A8MUP2 240 aa23.03■■□□□ 1.28
CAPNS1-205ENST00000588780 KIAA0391O15091 583 aaKnown RBP23.03■■□□□ 1.28
CAPNS1-205ENST00000588780 TNFSF14O43557 240 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms