RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 GCNT1Q02742 428 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 SIM2Q14190 667 aaPredicted RBP20.55■□□□□ 0.88
TPM4-208ENST00000588410 GAB4Q2WGN9 574 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 ANO4Q32M45 955 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 PREPLQ4J6C6 727 aaPredicted RBP20.55■□□□□ 0.88
TPM4-208ENST00000588410 RAB41Q5JT25 222 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 RSRC2Q7L4I2 434 aaKnown RBP20.55■□□□□ 0.88
TPM4-208ENST00000588410 WDR5BQ86VZ2 330 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 MIB1Q86YT6 1006 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 ZNF276Q8N554 614 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 UBA3Q8TBC4 463 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 EZH1Q92800 747 aaPredicted RBP20.55■□□□□ 0.88
TPM4-208ENST00000588410 WBP2Q969T9 261 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
TPM4-208ENST00000588410 ARHGEF4Q9NR80 690 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 SPHK2Q9NRA0 654 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 RASAL2Q9UJF2 1139 aa20.55■□□□□ 0.88
TPM4-208ENST00000588410 CACNA1IQ9P0X4 2223 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 O00370 1275 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 ZBED1O96006 694 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 PXNP49023 591 aaPredicted RBP20.54■□□□□ 0.88
TPM4-208ENST00000588410 YWHAGP61981 247 aaKnown RBP eCLIP20.54■□□□□ 0.88
TPM4-208ENST00000588410 EFEMP1Q12805 493 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 CEP68Q76N32 757 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 SYT13Q7L8C5 426 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 ARHGEF19Q8IW93 802 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 SIX6OS1Q8N1H7 587 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 DCLK2Q8N568 766 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 CAMKK1Q8N5S9 505 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 RBBP8NLQ8NC74 664 aaPredicted RBP20.54■□□□□ 0.88
TPM4-208ENST00000588410 KAT5Q92993 513 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 CNOT6LQ96LI5 555 aaKnown RBP20.54■□□□□ 0.88
TPM4-208ENST00000588410 ULBP1Q9BZM6 244 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 NUP62CLQ9H1M0 184 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 STRIP2Q9ULQ0 834 aa20.54■□□□□ 0.88
TPM4-208ENST00000588410 KIF26AQ9ULI4 1882 aaPredicted RBP20.54■□□□□ 0.88
TPM4-208ENST00000588410 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 K7EQS6 105 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 TULP2O00295 520 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 HOXC11O43248 304 aaPredicted RBP20.53■□□□□ 0.88
TPM4-208ENST00000588410 HRO43593 1189 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 KAT7O95251 611 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 GRIA2P42262 883 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 COG7P83436 770 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 KDSRQ06136 332 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 DMC1Q14565 340 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 STILQ15468 1287 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 LPAL2Q16609 132 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 C2orf27AQ580R0 203 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 LCLAT1Q6UWP7 414 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 NUDT18Q6ZVK8 323 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 C12orf40Q86WS4 652 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 TMEM25Q86YD3 366 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 KIAA2013Q8IYS2 634 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 NAT16Q8N8M0 369 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 USP33Q8TEY7 942 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 HHIPQ96QV1 700 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 POLR3BQ9NW08 1133 aaPredicted RBP20.53■□□□□ 0.88
TPM4-208ENST00000588410 DEC1Q9P2X7 70 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 DACH1Q9UI36 760 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 GREB1Q4ZG55 1949 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 DENND4CQ5VZ89 1909 aa20.53■□□□□ 0.88
TPM4-208ENST00000588410 CCDC163A0A0D9SF12 145 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 HMBSP08397 361 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 KRT5P13647 590 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 MRPS21P82921 87 aaKnown RBP20.52■□□□□ 0.88
TPM4-208ENST00000588410 ADIGQ0VDE8 80 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 SRSF5Q13243 272 aaKnown RBP20.52■□□□□ 0.88
TPM4-208ENST00000588410 CNGA2Q16280 664 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 PM20D1Q6GTS8 502 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 LAIR1Q6GTX8 287 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 TFAP2BQ92481 460 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 UBE2TQ9NPD8 197 aaPredicted RBP20.52■□□□□ 0.88
TPM4-208ENST00000588410 WDR35Q9P2L0 1181 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 ZNF510Q9Y2H8 683 aa20.52■□□□□ 0.88
TPM4-208ENST00000588410 TBC1D3BA6NDS4 549 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 M0QYV0 167 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 RNF225M0QZC1 329 aaPredicted RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 GREM1O60565 184 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 APBB3O95704 486 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 BRD2P25440 801 aaKnown RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 HOXC13P31276 330 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 MTIF2P46199 727 aaKnown RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 TPGS1Q6ZTW0 290 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 GPR161Q8N6U8 529 aaKnown RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 TSTD1Q8NFU3 115 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 RNF139Q8WU17 664 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 KCTD13Q8WZ19 329 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 XPO6Q96QU8 1125 aaKnown RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 BBS2Q9BXC9 721 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 DCLK3Q9C098 648 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 OLA1Q9NTK5 396 aaKnown RBP20.51■□□□□ 0.87
TPM4-208ENST00000588410 MARCH2Q9P0N8 246 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.51■□□□□ 0.87
TPM4-208ENST00000588410 MYO15AQ9UKN7 3530 aa20.51■□□□□ 0.87
TPM4-208ENST00000588410 SLC12A8A0AV02 714 aa20.5■□□□□ 0.87
TPM4-208ENST00000588410 NEDD8-MDP1E9PL57 170 aa20.5■□□□□ 0.87
TPM4-208ENST00000588410 AXIN1O15169 862 aa20.5■□□□□ 0.87
TPM4-208ENST00000588410 TULP3O75386 442 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms