RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 SP2Q02086 613 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.16□□□□□ -1.42
TUBD1-208ENST00000588009 SF3A3Q12874 501 aaKnown RBP eCLIP6.16□□□□□ -1.42
TUBD1-208ENST00000588009 CLCA4Q14CN2 919 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 LY6KQ17RY6 165 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 SLC9C2Q5TAH2 1124 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 ATG16L1Q676U5 607 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 GDF7Q7Z4P5 450 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 C11orf44Q8N8P7 122 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 USP38Q8NB14 1042 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 SYT8Q8NBV8 401 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 ATG4AQ8WYN0 398 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 CENPIQ92674 756 aaPredicted RBP6.16□□□□□ -1.42
TUBD1-208ENST00000588009 ZUFSPQ96AP4 578 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 FAM136AQ96C01 138 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 MCRS1Q96EZ8 462 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 PAAF1Q9BRP4 392 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 VN1R3Q9BXE9 311 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 AASSQ9UDR5 926 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 ARHGAP26Q9UNA1 814 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 FPGT-TNNI3KV9GXZ4 949 aa6.16□□□□□ -1.42
TUBD1-208ENST00000588009 A0A087X0M5 115 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 A0A1B0GX30 115 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 STX16-NPEPL1H3BU86 382 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 STX16O14662 325 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 TIMM44O43615 452 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 CYP21A2P08686 494 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 HNRNPA1P09651 372 aaKnown RBP eCLIP6.15□□□□□ -1.42
TUBD1-208ENST00000588009 GATA3P23771 443 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 CNR2P34972 360 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 PBX1P40424 430 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 MTHFSP49914 203 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 SCNN1GP51170 649 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 CASP6P55212 293 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 MTAPQ13126 283 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 CYP2A13Q16696 494 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 GEN1Q17RS7 908 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 P3H1Q32P28 736 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 CTXN3Q4LDR2 81 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 TMEM196Q5HYL7 178 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 ZNF569Q5MCW4 686 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 SLC9A4Q6AI14 798 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 DGAT2L7PQ6IED9 249 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 KRBA2Q6ZNG9 492 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 PIK3AP1Q6ZUJ8 805 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 RASGRP2Q7LDG7 609 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 IZUMO1Q8IYV9 350 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 ZNF808Q8N4W9 903 aaPredicted RBP6.15□□□□□ -1.42
TUBD1-208ENST00000588009 METTL25Q8N6Q8 603 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 UCMAQ8WVF2 138 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 NACC2Q96BF6 587 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 BOD1Q96IK1 185 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 PLEKHA5Q9HAU0 1116 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 LIN7CQ9NUP9 197 aaKnown RBP6.15□□□□□ -1.42
TUBD1-208ENST00000588009 TRPM5Q9NZQ8 1165 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 STEAP1Q9UHE8 339 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 JAG2Q9Y219 1238 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 DRG1Q9Y295 367 aaKnown RBP6.15□□□□□ -1.42
TUBD1-208ENST00000588009 SLC45A1Q9Y2W3 748 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 RABGAP1Q9Y3P9 1069 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 AFG3L2Q9Y4W6 797 aa6.15□□□□□ -1.42
TUBD1-208ENST00000588009 A6NCN8 305 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 GRXCR1A8MXD5 290 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 AHRRA9YTQ3 701 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 F5H0A9 414 aaPredicted RBP6.14□□□□□ -1.43
TUBD1-208ENST00000588009 EXOC5O00471 708 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 TRIM24O15164 1050 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 CYP27B1O15528 508 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 GPR42O15529 346 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 TSPAN3O60637 253 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 WDR47O94967 919 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 GSTM5P46439 218 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 PDCLQ13371 301 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 TOMM20Q15388 145 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 TBC1D10BQ4KMP7 808 aaPredicted RBP6.14□□□□□ -1.43
TUBD1-208ENST00000588009 SP5Q6BEB4 398 aaPredicted RBP6.14□□□□□ -1.43
TUBD1-208ENST00000588009 ACAD10Q6JQN1 1059 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 Q6ZSN1 163 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 SYNE4Q8N205 404 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 LRRC71Q8N4P6 559 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 PDILTQ8N807 584 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 ADAMTS18Q8TE60 1221 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 SLC22A17Q8WUG5 538 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 CCDC134Q9H6E4 229 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 TBX20Q9UMR3 447 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 ZBTB1Q9Y2K1 713 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 PCDHB7Q9Y5E2 793 aa6.14□□□□□ -1.43
TUBD1-208ENST00000588009 LOC105369274A0A096LPK9 316 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 LOC102723532A0A0G2JNH3 316 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 GXYLT2A0PJZ3 443 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 VWA3AA6NCI4 1184 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 SAC3D1A6NKF1 404 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 SLC38A8A6NNN8 435 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 PPM1DO15297 605 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 CTIFO43310 598 aaKnown RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 RECQL4O94761 1208 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 SCAF4O95104 1147 aaKnown RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 VNN1O95497 513 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms