RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.17□□□□□ -1.58
VMP1-205ENST00000587470 GABRQQ9UN88 632 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 BTBD3Q9Y2F9 522 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 UTRNP46939 3433 aa5.17□□□□□ -1.58
VMP1-205ENST00000587470 XRN1Q8IZH2 1706 aaKnown RBP5.17□□□□□ -1.58
VMP1-205ENST00000587470 PLEKHH1Q9ULM0 1364 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 A0A087WWL8 130 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 BTN3A1O00481 513 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 RFPL1O75677 317 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 PRKCBP05771 671 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 NPR1P16066 1061 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 TPTEP56180 551 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 CTBP1Q13363 440 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 CEP78Q5JTW2 689 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 TRIM72Q6ZMU5 477 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 TPH2Q8IWU9 490 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 ABRAQ8N0Z2 381 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 OR6B3Q8NGW1 331 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 CYP2W1Q8TAV3 490 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 DAZAP1Q96EP5 407 aaKnown RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 TAAR9Q96RI9 348 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 MACROD1Q9BQ69 325 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 DPCDQ9BVM2 203 aaPredicted RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 CDH19Q9H159 772 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 BHMT2Q9H2M3 363 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 TRMT13Q9NUP7 481 aaKnown RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 TNS1Q9HBL0 1735 aaKnown RBP5.16□□□□□ -1.58
VMP1-205ENST00000587470 GPRASP1Q5JY77 1395 aa5.16□□□□□ -1.58
VMP1-205ENST00000587470 H7C1Q1 480 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 TBC1D4O60343 1298 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 KCNA3P22001 575 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 ADORA2AP29274 412 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 AGFG1P52594 562 aaKnown RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 EPHB1P54762 984 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 ZIK1Q3SY52 487 aaPredicted RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 ANO6Q4KMQ2 910 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 PLA1AQ53H76 456 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 SLC18B1Q6NT16 456 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 C11orf87Q6NUJ2 197 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 CATSPERGQ6ZRH7 1159 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 CHSY1Q86X52 802 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 IZUMO1Q8IYV9 350 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 PNLDC1Q8NA58 520 aaKnown RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 PPP1R35Q8TAP8 253 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 NT5C1BQ96P26 610 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 ASB2Q96Q27 587 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 PRAM1Q96QH2 718 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 THAP7Q9BT49 309 aaPredicted RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 QTRT1Q9BXR0 403 aaKnown RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 DPH1Q9BZG8 443 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 MS4A7Q9GZW8 240 aaPredicted RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
VMP1-205ENST00000587470 ZSCAN32Q9NX65 697 aa5.15□□□□□ -1.59
VMP1-205ENST00000587470 DLC1Q96QB1 1528 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 NRKQ7Z2Y5 1582 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 ADAMTS3O15072 1205 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 PHGDHO43175 533 aaKnown RBP5.14□□□□□ -1.59
VMP1-205ENST00000587470 CTGFP29279 349 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 PRKAG1P54619 331 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 SLC13A2Q13183 592 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 L1TD1Q5T7N2 865 aaKnown RBP5.14□□□□□ -1.59
VMP1-205ENST00000587470 EPM2AIP1Q7L775 607 aaPredicted RBP5.14□□□□□ -1.59
VMP1-205ENST00000587470 CAND1Q86VP6 1230 aaKnown RBP5.14□□□□□ -1.59
VMP1-205ENST00000587470 TERB1Q8NA31 727 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 PPP2R3CQ969Q6 453 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 RSPRY1Q96DX4 576 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 LENG8Q96PV6 779 aaPredicted RBP5.14□□□□□ -1.59
VMP1-205ENST00000587470 SH2D3AQ9BRG2 576 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 ZIM2Q9NZV7 527 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 RREB1Q92766 1687 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 TONSLQ96HA7 1378 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 NWD2Q9ULI1 1742 aa5.14□□□□□ -1.59
VMP1-205ENST00000587470 POC1B-GALNT4F8VUJ3 575 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 TP73O15350 636 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 MARCH6O60337 910 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 TUSC2O75896 110 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 PDE8BO95263 885 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 KITP10721 976 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 PTGER1P34995 402 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 RAB32Q13637 225 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 LY6KQ17RY6 165 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 SLC9A4Q6AI14 798 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 NPNTQ6UXI9 565 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 GALNT16Q8N428 558 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 GALNT4Q8N4A0 578 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 Q8N9P0 234 aaPredicted RBP5.13□□□□□ -1.59
VMP1-205ENST00000587470 ZBTB34Q8NCN2 500 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 BPIFB1Q8TDL5 484 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 SNX18Q96RF0 628 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 ANLNQ9NQW6 1124 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 TFCP2L1Q9NZI6 479 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 PAXBP1Q9Y5B6 917 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 SNX14Q9Y5W7 946 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 NUP188Q5SRE5 1749 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 SHANK3Q9BYB0 1731 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 KIAA1210Q9ULL0 1709 aa5.13□□□□□ -1.59
VMP1-205ENST00000587470 MYOM1P52179 1685 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms