RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SIM2Q14190 667 aaPredicted RBP18.61■□□□□ 0.57
TPM4-206ENST00000587201 LPAL2Q16609 132 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 RAB41Q5JT25 222 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 BTBD8Q5XKL5 378 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 KLHDC10Q6PID8 442 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 HTR3DQ70Z44 454 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 WDR5BQ86VZ2 330 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 EHBP1Q8NDI1 1231 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 LMO3Q8TAP4 145 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 KAT5Q92993 513 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 ACDQ96AP0 544 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 CDK5RAP1Q96SZ6 601 aaKnown RBP18.61■□□□□ 0.57
TPM4-206ENST00000587201 PNKPQ96T60 521 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 SPHK2Q9NRA0 654 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 POLR3BQ9NW08 1133 aaPredicted RBP18.61■□□□□ 0.57
TPM4-206ENST00000587201 CLIC5Q9NZA1 410 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 KIAA1257Q9ULG3 409 aa18.61■□□□□ 0.57
TPM4-206ENST00000587201 K7EQS6 105 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 TULP2O00295 520 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 XPO1O14980 1071 aaKnown RBP18.6■□□□□ 0.57
TPM4-206ENST00000587201 HRO43593 1189 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 APODP05090 189 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 PXNP49023 591 aaPredicted RBP18.6■□□□□ 0.57
TPM4-206ENST00000587201 ANO4Q32M45 955 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 RRAGAQ7L523 313 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 SYT13Q7L8C5 426 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 C12orf40Q86WS4 652 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 KIAA2013Q8IYS2 634 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 ARHGAP18Q8N392 663 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 CAMKK1Q8N5S9 505 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 UBA3Q8TBC4 463 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 LRRC4Q9HBW1 653 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 RASAL2Q9UJF2 1139 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 GMEB2Q9UKD1 530 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 ATG2BQ96BY7 2078 aa18.6■□□□□ 0.57
TPM4-206ENST00000587201 EP300Q09472 2414 aaPredicted RBP18.59■□□□□ 0.57
TPM4-206ENST00000587201 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.59■□□□□ 0.57
TPM4-206ENST00000587201 KAT7O95251 611 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 PAEPP09466 180 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 KDSRQ06136 332 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 DMC1Q14565 340 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 C2orf27AQ580R0 203 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 CEP68Q76N32 757 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 TMEM25Q86YD3 366 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 MIB1Q86YT6 1006 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 ARHGEF19Q8IW93 802 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 NAT16Q8N8M0 369 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 USP33Q8TEY7 942 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 CNOT6LQ96LI5 555 aaKnown RBP18.59■□□□□ 0.57
TPM4-206ENST00000587201 ULBP1Q9BZM6 244 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
TPM4-206ENST00000587201 RNF225M0QZC1 329 aaPredicted RBP18.58■□□□□ 0.56
TPM4-206ENST00000587201 O00370 1275 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 HOXC11O43248 304 aaPredicted RBP18.58■□□□□ 0.56
TPM4-206ENST00000587201 GREM1O60565 184 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 ZBED1O96006 694 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 SETSIPP0DME0 302 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 YWHAGP61981 247 aaKnown RBP eCLIP18.58■□□□□ 0.56
TPM4-206ENST00000587201 GCNT1Q02742 428 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 MESP2Q0VG99 397 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 EFEMP1Q12805 493 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 LCLAT1Q6UWP7 414 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 RSRC2Q7L4I2 434 aaKnown RBP18.58■□□□□ 0.56
TPM4-206ENST00000587201 MLKLQ8NB16 471 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 RBBP8NLQ8NC74 664 aaPredicted RBP18.58■□□□□ 0.56
TPM4-206ENST00000587201 INTS2Q9H0H0 1204 aaKnown RBP18.58■□□□□ 0.56
TPM4-206ENST00000587201 GVINP1Q7Z2Y8 2422 aa18.58■□□□□ 0.56
TPM4-206ENST00000587201 OTOGLQ3ZCN5 2332 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 CCDC163A0A0D9SF12 145 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 ANTXRLA6NF34 631 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 STC2O76061 302 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 HMBSP08397 361 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 BRD2P25440 801 aaKnown RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 GRIA2P42262 883 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 MRPS21P82921 87 aaKnown RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 COG7P83436 770 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 ADIGQ0VDE8 80 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 TPD52L1Q16890 204 aaPredicted RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 PREPLQ4J6C6 727 aaPredicted RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 PM20D1Q6GTS8 502 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 LAIR1Q6GTX8 287 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 TPGS1Q6ZTW0 290 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 SFTPA1Q8IWL2 248 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 TFAP2BQ92481 460 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 NDRG1Q92597 394 aaKnown RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
TPM4-206ENST00000587201 DEC1Q9P2X7 70 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 GPR179Q6PRD1 2367 aa18.57■□□□□ 0.56
TPM4-206ENST00000587201 MYOFQ9NZM1 2061 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 TBC1D3BA6NDS4 549 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 NEDD8-MDP1E9PL57 170 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 AXIN1O15169 862 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 TULP3O75386 442 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 APBB3O95704 486 aa18.56■□□□□ 0.56
TPM4-206ENST00000587201 TIE1P35590 1138 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms