RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 IQANK1A0A1B0GTG1 560 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 MYADML2A6NDP7 307 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 COPEO14579 308 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 GPR182O15218 404 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ADCY6O43306 1168 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 KITP10721 976 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 STIP1P31948 543 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ATN1P54259 1190 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 PTK7Q13308 1070 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 MOGSQ13724 837 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 DPYSL3Q14195 570 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 EFTUD2Q15029 972 aaKnown RBP eCLIP12.93□□□□□ -0.347e-7■■■■■ 38.1
SMARCA4-208ENST00000585799 CCDC14Q49A88 953 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 GLB1LQ6UWU2 654 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 NT5DC4Q86YG4 428 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 TROVE2P10155 538 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 CPB1P15086 417 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 GOT1P17174 413 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 PCSK1P29120 753 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ZNF132P52740 706 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 GBE1Q04446 702 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 QPCTQ16769 361 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 KLHL38Q2WGJ6 581 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 MROH9Q5TGP6 573 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 SDHAF4Q5VUM1 108 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ANKRD52Q8NB46 1076 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 DOCK5Q9H7D0 1870 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 LPXNO60711 386 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 TADA2AO75478 443 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 LILRA4P59901 499 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 OVGP1Q12889 678 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 CYP1B1Q16678 543 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 LVRNQ6Q4G3 990 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 TMPRSS4Q9NRS4 437 aa12.93□□□□□ -0.34
SMARCA4-208ENST00000585799 ASGR1P07306 291 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 NUDT17P0C025 328 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 TFE3P19532 575 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 HOXA11P31270 313 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 TRIM32Q13049 653 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 ANKRD20A3Q5VUR7 823 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 KIAA1841Q6NSI8 718 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 CDKL2Q92772 493 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PGM2Q96G03 612 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 LGMNQ99538 433 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM129AQ9BZQ8 928 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 C12orf65Q9H3J6 166 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 DDX20Q9UHI6 824 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 ATP8B3O60423 1300 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 KRT37O76014 449 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 F2P00734 622 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 SETSIPP0DME0 302 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PROZP22891 400 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 CLCNKBP51801 687 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PRKCZQ05513 592 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PDK2Q15119 407 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 ANKRD20A8PQ5CZ79 823 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 KCNK16Q96T55 309 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 BCO2Q9BYV7 579 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 VPS11Q9H270 941 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 PCDH18Q9HCL0 1135 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 SOX4Q06945 474 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 KLHL29Q96CT2 875 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
SMARCA4-208ENST00000585799 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 SPTLC1O15269 473 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 AXLP30530 894 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 BZW1Q7L1Q6 419 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 RNF180Q86T96 592 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 CYP4X1Q8N118 509 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 PDCD7Q8N8D1 485 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 WDCPQ9H6R7 721 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 MARCOQ9UEW3 520 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 SHOC2Q9UQ13 582 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 H0YGN5 161 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 ABLIM1O14639 778 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 OR4Q2P0C623 313 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 FGFR1P11362 822 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 ENPEPQ07075 957 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
SMARCA4-208ENST00000585799 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms