RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.33
SS18-225ENST00000585121 STILQ15468 1287 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 PIGZQ86VD9 579 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 ZNF276Q8N554 614 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 MLKLQ8NB16 471 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 KLF16Q9BXK1 252 aaPredicted RBP13.02□□□□□ -0.33
SS18-225ENST00000585121 NMUR1Q9HB89 426 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 SPHK2Q9NRA0 654 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 GPR179Q6PRD1 2367 aa13.02□□□□□ -0.33
SS18-225ENST00000585121 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 ZBED1O96006 694 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 SETSIPP0DME0 302 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 GRIA2P42262 883 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 PGFP49763 221 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 TKTL1P51854 596 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 COG7P83436 770 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 DMWDQ09019 674 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 ANO4Q32M45 955 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 RAB41Q5JT25 222 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 PKN3Q6P5Z2 889 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 RSRC2Q7L4I2 434 aaKnown RBP13.01□□□□□ -0.33
SS18-225ENST00000585121 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 TTC30AQ86WT1 665 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 BBS7Q8IWZ6 715 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 ARHGEF4Q9NR80 690 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 OSER1Q9NX31 292 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 NUDT5Q9UKK9 219 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 ZNF510Q9Y2H8 683 aa13.01□□□□□ -0.33
SS18-225ENST00000585121 MYH10P35580 1976 aa13□□□□□ -0.33
SS18-225ENST00000585121 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
SS18-225ENST00000585121 KAT7O95251 611 aa13□□□□□ -0.33
SS18-225ENST00000585121 SLC6A11P48066 632 aa13□□□□□ -0.33
SS18-225ENST00000585121 SEC13P55735 322 aa13□□□□□ -0.33
SS18-225ENST00000585121 YWHAGP61981 247 aaKnown RBP eCLIP13□□□□□ -0.33
SS18-225ENST00000585121 MRPS21P82921 87 aaKnown RBP13□□□□□ -0.33
SS18-225ENST00000585121 GCNT1Q02742 428 aa13□□□□□ -0.33
SS18-225ENST00000585121 PDE4CQ08493 712 aa13□□□□□ -0.33
SS18-225ENST00000585121 DMC1Q14565 340 aa13□□□□□ -0.33
SS18-225ENST00000585121 C2orf27AQ580R0 203 aa13□□□□□ -0.33
SS18-225ENST00000585121 RRAGAQ7L523 313 aa13□□□□□ -0.33
SS18-225ENST00000585121 SCD5Q86SK9 330 aa13□□□□□ -0.33
SS18-225ENST00000585121 MIB1Q86YT6 1006 aa13□□□□□ -0.33
SS18-225ENST00000585121 KIAA2013Q8IYS2 634 aa13□□□□□ -0.33
SS18-225ENST00000585121 SIX6OS1Q8N1H7 587 aa13□□□□□ -0.33
SS18-225ENST00000585121 UBR7Q8N806 425 aa13□□□□□ -0.33
SS18-225ENST00000585121 XPO6Q96QU8 1125 aaKnown RBP13□□□□□ -0.33
SS18-225ENST00000585121 DCLK3Q9C098 648 aa13□□□□□ -0.33
SS18-225ENST00000585121 INTS2Q9H0H0 1204 aaKnown RBP13□□□□□ -0.33
SS18-225ENST00000585121 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
SS18-225ENST00000585121 DEC1Q9P2X7 70 aa13□□□□□ -0.33
SS18-225ENST00000585121 DACH1Q9UI36 760 aa13□□□□□ -0.33
SS18-225ENST00000585121 RASAL2Q9UJF2 1139 aa13□□□□□ -0.33
SS18-225ENST00000585121 OTOGLQ3ZCN5 2332 aa13□□□□□ -0.33
SS18-225ENST00000585121 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 K7EQS6 105 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 O00370 1275 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 MDM4O15151 490 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 HRO43593 1189 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 APBB3O95704 486 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 TNFRSF4P43489 277 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 KDSRQ06136 332 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 EFEMP1Q12805 493 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 CNGA2Q16280 664 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 LPAL2Q16609 132 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 GAB4Q2WGN9 574 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 HSF5Q4G112 596 aaPredicted RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 TMEM25Q86YD3 366 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 NAT16Q8N8M0 369 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 TSTD1Q8NFU3 115 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 LMO3Q8TAP4 145 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 UBA3Q8TBC4 463 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 RNF139Q8WU17 664 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 CNOT6LQ96LI5 555 aaKnown RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 FAM81BQ96LP2 452 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 HHIPQ96QV1 700 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 ULBP1Q9BZM6 244 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 OLA1Q9NTK5 396 aaKnown RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 ZNF292O60281 2723 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 FANCMQ8IYD8 2048 aa12.99□□□□□ -0.33
SS18-225ENST00000585121 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
SS18-225ENST00000585121 AXIN1O15169 862 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 RETP07949 1114 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 KRT5P13647 590 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 MTIF2P46199 727 aaKnown RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
SS18-225ENST00000585121 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
SS18-225ENST00000585121 FAM114A1Q8IWE2 563 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms