RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 OTUB2Q96DC9 234 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 B3GNT5Q9BYG0 378 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 PRORYQ9H606 182 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 GAREM1Q9H706 876 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 PRDM16Q9HAZ2 1276 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 INTS13Q9NVM9 706 aa19.22■□□□□ 0.67
TOP3A-220ENST00000585031 GOLGA8CPA6NN73 597 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 CILPO75339 1184 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
TOP3A-220ENST00000585031 HS2ST1Q7LGA3 356 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 GALNT15Q8N3T1 639 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 ZNF843Q8N446 348 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 FOXJ1Q92949 421 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 SNX21Q969T3 373 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 HVCN1Q96D96 273 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 TM7SF3Q9NS93 570 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 DNAJC17Q9NVM6 304 aaKnown RBP19.21■□□□□ 0.67
TOP3A-220ENST00000585031 WSB2Q9NYS7 404 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-220ENST00000585031 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
TOP3A-220ENST00000585031 MUC22E2RYF6 1773 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-220ENST00000585031 A0A1B0GTW7 788 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 TMEM191BP0C7N4 346 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 IRF1P10914 325 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 YWHAQP27348 245 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 CD6P30203 668 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 ABCG1P45844 678 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 MAPRE1Q15691 268 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 HLA-BQ31612 363 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 WDR45BQ5MNZ6 344 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 LARP1BQ659C4 914 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 GRAMD4Q6IC98 578 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 KIAA1324Q6UXG2 1013 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 PDCD7Q8N8D1 485 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 C1orf216Q8TAB5 229 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 NOC3LQ8WTT2 800 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 DNAJC19Q96DA6 116 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 TOE1Q96GM8 510 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 SLITRK1Q96PX8 696 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 ACCSQ96QU6 501 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 KCNK16Q96T55 309 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 GPR174Q9BXC1 333 aa19.2■□□□□ 0.66
TOP3A-220ENST00000585031 MRPL44Q9H9J2 332 aaKnown RBP19.2■□□□□ 0.66
TOP3A-220ENST00000585031 CST3P01034 146 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 CISD3P0C7P0 127 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 PTPN1P18031 435 aaKnown RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 GARTP22102 1010 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 ITPKBP27987 946 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 GNL1P36915 607 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 HECTD3Q5T447 861 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 NUP93Q8N1F7 819 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 FBXO32Q969P5 355 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 ZSCAN31Q96LW9 406 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 MMS19Q96T76 1030 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 CDC6Q99741 560 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 DUSP9Q99956 384 aaKnown RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 MKRN2Q9H000 416 aaKnown RBP19.19■□□□□ 0.66
TOP3A-220ENST00000585031 MIR1-1HGQ9H1L0 117 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 EHD2Q9NZN4 543 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 SH3BP1Q9Y3L3 701 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 PCDHGB2Q9Y5G2 931 aa19.19■□□□□ 0.66
TOP3A-220ENST00000585031 E9PAM4 449 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 NEDD8-MDP1E9PL57 170 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 CACNG3O60359 315 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 LDHAP00338 332 aaKnown RBP19.18■□□□□ 0.66
TOP3A-220ENST00000585031 NCAM1P13591 858 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 MYO1EQ12965 1108 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 SMAD1Q15797 465 aaKnown RBP19.18■□□□□ 0.66
TOP3A-220ENST00000585031 FUT11Q495W5 492 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 DCAF12L1Q5VU92 463 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 SNX30Q5VWJ9 437 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 PAQR9Q6ZVX9 377 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 KRI1Q8N9T8 703 aaKnown RBP19.18■□□□□ 0.66
TOP3A-220ENST00000585031 PIP4K2CQ8TBX8 421 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 RHBDD1Q8TEB9 315 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 EPSTI1Q96J88 318 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 KIF2CQ99661 725 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 IL37Q9NZH6 218 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 USP36Q9P275 1121 aaKnown RBP19.18■□□□□ 0.66
TOP3A-220ENST00000585031 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
TOP3A-220ENST00000585031 MYLKQ15746 1914 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 TP53BP1Q12888 1972 aaPredicted RBP19.17■□□□□ 0.66
TOP3A-220ENST00000585031 ZBTB24O43167 697 aaPredicted RBP19.17■□□□□ 0.66
TOP3A-220ENST00000585031 TBX18O95935 607 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 ZDHHC11BP0C7U3 371 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 TYRP14679 529 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 PREPLQ4J6C6 727 aaPredicted RBP19.17■□□□□ 0.66
TOP3A-220ENST00000585031 SDE2Q6IQ49 451 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 TPGS1Q6ZTW0 290 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 CBWD2Q8IUF1 395 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 ANKRD36BP1Q96IX9 119 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 DCBLD2Q96PD2 775 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 ITM2CQ9NQX7 267 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 GMIPQ9P107 970 aa19.17■□□□□ 0.66
TOP3A-220ENST00000585031 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.17■□□□□ 0.66
TOP3A-220ENST00000585031 A0A1B0GVT2 93 aa19.16■□□□□ 0.66
TOP3A-220ENST00000585031 MEI4A8MW99 385 aa19.16■□□□□ 0.66
TOP3A-220ENST00000585031 GCNT3O95395 438 aa19.16■□□□□ 0.66
TOP3A-220ENST00000585031 MATKP42679 507 aa19.16■□□□□ 0.66
TOP3A-220ENST00000585031 PTPRNQ16849 979 aa19.16■□□□□ 0.66
TOP3A-220ENST00000585031 NUDT18Q6ZVK8 323 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms