RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 HMGXB4Q9UGU5 601 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 PILRBQ9UKJ0 227 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 HCN2Q9UL51 889 aa17.55■□□□□ 0.4
CCDC57-219ENST00000584717 FAM92AA1XBS5 289 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 TLR5O60602 858 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 BEST1O76090 585 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 TBX18O95935 607 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 C4BPAP04003 597 aaKnown RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 MAP3K7CLP57077 242 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 PREPLQ4J6C6 727 aaPredicted RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 SPDYCQ5MJ68 293 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 EGFLAMQ63HQ2 1017 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 SLC23A3Q6PIS1 610 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 SLC2A14Q8TDB8 520 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 PARD3BQ8TEW8 1205 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 GTPBP2Q9BX10 602 aaKnown RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 FAM49BQ9NUQ9 324 aa17.54■□□□□ 0.4
CCDC57-219ENST00000584717 DNAJC17Q9NVM6 304 aaKnown RBP17.54■□□□□ 0.4
CCDC57-219ENST00000584717 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 AP5Z1O43299 807 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 NTSR1P30989 418 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 NDST1P52848 882 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 AP3M2P53677 418 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 DLG4P78352 724 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 PEAR1Q5VY43 1037 aaPredicted RBP17.53■□□□□ 0.4
CCDC57-219ENST00000584717 GRAMD4Q6IC98 578 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 NUDT18Q6ZVK8 323 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 JAKMIP2Q96AA8 810 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 ACOX2Q99424 681 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 DUSP9Q99956 384 aaKnown RBP17.53■□□□□ 0.4
CCDC57-219ENST00000584717 SLC32A1Q9H598 525 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 PKD1L2Q7Z442 2459 aa17.53■□□□□ 0.4
CCDC57-219ENST00000584717 DSPP15924 2871 aaKnown RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 SPAARA0A1B0GVQ0 90 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 A0A1W2PQF6 199 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 HYAL3O43820 417 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 ADORA2BP29275 332 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 DPP6P42658 865 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 ATXN3P54252 364 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 CLDN10P78369 228 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 SPOPLQ6IQ16 392 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 SLC36A4Q6YBV0 504 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 TPGS1Q6ZTW0 290 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 HTR3DQ70Z44 454 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 GPRIN1Q7Z2K8 1008 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 C12orf29Q8N999 325 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 KDF1Q8NAX2 398 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 GOLGA5Q8TBA6 731 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 GATA6Q92908 595 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 BBS2Q9BXC9 721 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 KLF16Q9BXK1 252 aaPredicted RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 FBXO44Q9H4M3 255 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 TLR8Q9NR97 1041 aaKnown RBP17.52■□□□□ 0.4
CCDC57-219ENST00000584717 SLC6A14Q9UN76 642 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 CYP8B1Q9UNU6 501 aa17.52■□□□□ 0.4
CCDC57-219ENST00000584717 IGHV1OR15-9A0A0B4J2B8 117 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 CYP26A1O43174 497 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 GREM1O60565 184 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 P4HA1P13674 534 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 TYRP14679 529 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 NDUFV2P19404 249 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 HOXD12P35452 270 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 ME1P48163 572 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 DUOXA1Q1HG43 343 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 RESP18Q5W5W9 173 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 TOGARAM2Q6ZUX3 1019 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 PIP4P1Q86T03 277 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 CHPFQ8IZ52 775 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 HDDC3Q8N4P3 179 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 OR2I1PQ8NGU4 316 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 SLC6A17Q9H1V8 727 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 CSNK1G1Q9HCP0 422 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 CD93Q9NPY3 652 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 DMAC2Q9NW81 257 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 OSER1Q9NX31 292 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 DMXL2Q8TDJ6 3036 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 PCDH15Q96QU1 1955 aa17.51■□□□□ 0.39
CCDC57-219ENST00000584717 PRRT4C9JH25 899 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 MDM4O15151 490 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 KLRC4O43908 158 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 CACNG3O60359 315 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 SERPINF2P08697 491 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 FAM200BP0CF97 657 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 ATP5C1P36542 298 aaKnown RBP17.5■□□□□ 0.39
CCDC57-219ENST00000584717 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
CCDC57-219ENST00000584717 SIM1P81133 766 aaPredicted RBP17.5■□□□□ 0.39
CCDC57-219ENST00000584717 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
CCDC57-219ENST00000584717 ZNF33AQ06730 810 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 STK4Q13043 487 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 SEMA3BQ13214 749 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 SGSM1Q2NKQ1 1148 aa17.5■□□□□ 0.39
CCDC57-219ENST00000584717 ZACNQ401N2 412 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms