RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 MSCO60682 206 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 POMCP01189 267 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 JCHAINP01591 159 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 ZFXP17010 805 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-218ENST00000584450 IL1R2P27930 398 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 GRIK1P39086 918 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 CASP2P42575 452 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 CDKN2BP42772 138 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 SLC26A2P50443 739 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 AQP5P55064 265 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 RGS9BPQ6ZS82 235 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 SLC26A11Q86WA9 606 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 MYLK4Q86YV6 388 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-218ENST00000584450 SLC25A41Q8N5S1 370 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 ALKBH8Q96BT7 664 aaKnown RBP12.37□□□□□ -0.43
ERBB2-218ENST00000584450 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 ASB7Q9H672 318 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 ACSS2Q9NR19 701 aa12.37□□□□□ -0.43
ERBB2-218ENST00000584450 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
ERBB2-218ENST00000584450 CXCL11O14625 94 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GIPC1O14908 333 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 STILQ15468 1287 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TTC39CQ8N584 583 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 POU5F2Q8N7G0 328 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 CCDC97Q96F63 343 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TMEM120AQ9BXJ8 343 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 VCXQ9H320 206 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 CYP3A43Q9HB55 503 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TUBGCP4Q9UGJ1 667 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 HCRTO43612 131 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TRUB2O95900 331 aaKnown RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 CD4P01730 458 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 ZNF157P51786 506 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TKTL1P51854 596 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GBE1Q04446 702 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 BTBD8Q5XKL5 378 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TRABD2AQ86V40 505 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.36□□□□□ -0.438e-10■□□□□ 9.7
ERBB2-218ENST00000584450 FBXO41Q8TF61 875 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 FBXO6Q9NRD1 293 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 SSX2IPQ9Y2D8 614 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 LRP5O75197 1615 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 KRT16P08779 473 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GNAT1P11488 350 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 CETPP11597 493 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TCN1P20061 433 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 MX2P20592 715 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 MGAT1P26572 445 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 SERPINB4P48594 390 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 CUL3Q13618 768 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 PMF1Q6P1K2 205 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 AGAP11Q8TF27 550 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 GBP5Q96PP8 586 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 WWP1Q9H0M0 922 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 SLC24A2Q9UI40 661 aa12.36□□□□□ -0.43
ERBB2-218ENST00000584450 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
ERBB2-218ENST00000584450 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 KPNA7A9QM74 516 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 CCDC22O60826 627 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 ELF1P32519 619 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 SLC6A3Q01959 620 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 USP10Q14694 798 aaKnown RBP12.35□□□□□ -0.43
ERBB2-218ENST00000584450 EFHC1Q5JVL4 640 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 POLNQ7Z5Q5 900 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 CNPY4Q8N129 248 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
ERBB2-218ENST00000584450 PPWD1Q96BP3 646 aaKnown RBP12.35□□□□□ -0.43
ERBB2-218ENST00000584450 SPDL1Q96EA4 605 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 KRT82Q9NSB4 513 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 FAM237BA0A1B0GVD1 139 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 MAP3K7O43318 606 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 SMIM24O75264 130 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 TRPA1O75762 1119 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 PAEPP09466 180 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 GOT1P17174 413 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 BCAT1P54687 386 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 ART3Q13508 389 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 CPT1BQ92523 772 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 GAD1Q99259 594 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
ERBB2-218ENST00000584450 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
ERBB2-218ENST00000584450 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 TASP1Q9H6P5 420 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 STOML1Q9UBI4 398 aa12.35□□□□□ -0.43
ERBB2-218ENST00000584450 TCRBV9S1A1TA0A576 114 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms