RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 SORCS3Q9UPU3 1222 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 TNS3Q68CZ2 1445 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 H0YC42 278 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 GIT2Q14161 759 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 NUDT18Q6ZVK8 323 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 ZNF75CPQ92670 426 aaPredicted RBP13.44□□□□□ -0.26
RNF43-208ENST00000584437 OSBPL10Q9BXB5 764 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 POLG2Q9UHN1 485 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 TPRKBQ9Y3C4 175 aa13.44□□□□□ -0.26
RNF43-208ENST00000584437 C19orf81C9J6K1 198 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 OGTO15294 1046 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 FAM153BP0C7A2 387 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 ITGA4P13612 1032 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 RPL21P46778 160 aaKnown RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 DGKDQ16760 1214 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 FAM153CQ494X1 144 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 KCNT1Q5JUK3 1230 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 CCDC149Q6ZUS6 474 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 ATG16L2Q8NAA4 619 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TATDN2Q93075 761 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TMEM237Q96Q45 408 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 AXIN2Q9Y2T1 843 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TBC1D12O60347 775 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 GALNTL6Q49A17 601 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 RORBQ92753 470 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 MRPL48Q96GC5 212 aaKnown RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 TMEM51Q9NW97 253 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 NINJ2Q9NZG7 142 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 M0QYT0 321 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 HBP1O60381 514 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 IL12RB1P42701 662 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 GLRBP48167 497 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 CDK7P50613 346 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 KRT78Q8N1N4 520 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 LRRN4CLQ8ND94 238 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 STKLD1Q8NE28 680 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 FAM120BQ96EK7 910 aaKnown RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 KCNK4Q9NYG8 393 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 ENOPH1Q9UHY7 261 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 CLCA2Q9UQC9 943 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 CENPXA8MT69 81 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TPBGLP0DKB5 382 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 NUP62P37198 522 aaPredicted RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 CASP4P49662 377 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TAF6P49848 677 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 ST8SIA6P61647 398 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 INAQ16352 499 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 FOXR1Q6PIV2 292 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 CHSY1Q86X52 802 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 OR6J1Q8NGC5 347 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
RNF43-208ENST00000584437 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 WDCPQ9H6R7 721 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 PIM2Q9P1W9 311 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 STARD13Q9Y3M8 1113 aa13.43□□□□□ -0.26
RNF43-208ENST00000584437 TRIM13O60858 407 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 MED24O75448 989 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CSPG5O95196 566 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ATP4AP20648 1035 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 PIK3R1P27986 724 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 IFI35P80217 286 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 N4BP2L1Q5TBK1 243 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 GRTP1Q5TC63 336 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 STRIP1Q5VSL9 837 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 TTC27Q6P3X3 843 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ACTL9Q8TC94 416 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 USP18Q9UMW8 372 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 TK2O00142 265 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 PEX1O43933 1283 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 GH1P01241 217 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ITGB3P05106 788 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 GP5P40197 560 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 HMGCS2P54868 508 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 MEA1Q16626 185 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 DDR2Q16832 855 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CBWD2Q8IUF1 395 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CREG2Q8IUH2 290 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 EID3Q8N140 333 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 DHRSXQ8N5I4 330 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 PRCCQ92733 491 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 CGRRF1Q99675 332 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 APOL4Q9BPW4 351 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 DCUN1D5Q9BTE7 237 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 DDIT4Q9NX09 232 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 HMBSP08397 361 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 ALOX15P16050 662 aaPredicted RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 VAC14Q08AM6 782 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 NAB1Q13506 487 aa13.42□□□□□ -0.26
RNF43-208ENST00000584437 SAMD4BQ5PRF9 694 aaKnown RBP13.42□□□□□ -0.26
RNF43-208ENST00000584437 HDAC7Q8WUI4 952 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms