RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 FAM90A10PA6NDY2 464 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 AGPSO00116 658 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 RRP9O43818 475 aaKnown RBP4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 TUSC2O75896 110 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CBSLP0DN79 551 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CCKARP32238 428 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CBSP35520 551 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 RAB27AP51159 221 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 YPEL5P62699 121 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 TIAL1Q01085 375 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 ID2Q02363 134 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 LEXMQ3ZCV2 418 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 C4orf46Q504U0 113 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 RANBP10Q6VN20 620 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 IGFBPL1Q8WX77 278 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 BRIP1Q9BX63 1249 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 BRINP2Q9C0B6 783 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CPNE7Q9UBL6 633 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 ASAP1Q9ULH1 1129 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 CFAP43Q8NDM7 1665 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 FANCIQ9NVI1 1328 aa4.92□□□□□ -1.62
SMCHD1-208ENST00000583344 UACAQ9BZF9 1416 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 PDS5BQ9NTI5 1447 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 LOC102723971A0A1B0GUV8 181 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 EXOC5O00471 708 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 TMPRSS11DO60235 418 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 TLR2O60603 784 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 RASSF9O75901 435 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 MCM5P33992 734 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 PTDSS1P48651 473 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 SUMO3P55854 103 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 SLC14A1Q13336 389 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 INSCQ1MX18 579 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 CC2D1BQ5T0F9 858 aaKnown RBP4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 DENND2CQ68D51 928 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 MAEAQ7L5Y9 396 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 STAG1Q8WVM7 1258 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 STK31Q9BXU1 1019 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 C22orf23Q9BZE7 217 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 SACM1LQ9NTJ5 587 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 FYCO1Q9BQS8 1478 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 MRC2Q9UBG0 1479 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 EFCAB5A4FU69 1503 aa4.91□□□□□ -1.62
SMCHD1-208ENST00000583344 TRIM43BA6NCK2 446 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 MBD3L4A6NDZ8 208 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 MBD3L3A6NE82 208 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 CD8B2A6NJW9 211 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 H3BNX3 289 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 PYCARD-AS1I3L0S3 204 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 ALPLP05186 524 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 PSG1P11464 419 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 IBSPP21815 317 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 KLRC1P26715 233 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 PGDP52209 483 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 DEUP1Q05D60 604 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 SRSF1Q07955 248 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 MFSD13AQ14CX5 517 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 TWIST1Q15672 202 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 VSTM1Q6UX27 236 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 NOL8Q76FK4 1167 aaKnown RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 ANKRD13BQ86YJ7 626 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 METTL25Q8N6Q8 603 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 TRIM43Q96BQ3 446 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 RIMKLBQ9ULI2 386 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 SQORQ9Y6N5 450 aa4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 ARID4BQ4LE39 1312 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-208ENST00000583344 HFM1A2PYH4 1435 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 hCG_2014768A0A024R1R8 64 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 E2F8A0AVK6 867 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 CAPN8A6NHC0 703 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 CLIC1O00299 241 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 PIAS2O75928 621 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 CTSAP10619 480 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 BRAFP15056 766 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 HTR6P50406 440 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 STK3Q13188 491 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 MIDNQ504T8 468 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 C3orf38Q5JPI3 329 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 ANO7Q6IWH7 933 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 APOA5Q6Q788 366 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 DEF8Q6ZN54 512 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 C11orf44Q8N8P7 122 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 EDC3Q96F86 508 aaKnown RBP4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 CDH19Q9H159 772 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 POT1Q9NUX5 634 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 HDAC9Q9UKV0 1011 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 PAXBP1Q9Y5B6 917 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 FMN1Q68DA7 1419 aa4.89□□□□□ -1.63
SMCHD1-208ENST00000583344 WDR62O43379 1518 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ABCA10Q8WWZ4 1543 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 RAB27BO00194 218 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CCP110O43303 1012 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 MARCH6O60337 910 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CTNND1O60716 968 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CNOT3O75175 753 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms