RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 RDXP35241 583 aaKnown RBP14.37□□□□□ -0.11
SS18-222ENST00000582792 SLC5A3P53794 718 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 MYL6P60660 151 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 TRPC3Q13507 836 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 ANO4Q32M45 955 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 FAM35AQ86V20 835 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 MINDY1Q8N5J2 469 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 DEFB119Q8N690 84 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 ZNF516Q92618 1163 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 WBP2Q969T9 261 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 SYAP1Q96A49 352 aaPredicted RBP14.37□□□□□ -0.11
SS18-222ENST00000582792 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
SS18-222ENST00000582792 XYLT2Q9H1B5 865 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
SS18-222ENST00000582792 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
SS18-222ENST00000582792 NXF1Q9UBU9 619 aaKnown RBP14.37□□□□□ -0.11
SS18-222ENST00000582792 ARHGAP33O14559 1287 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 TRIM24O15164 1050 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 CLIC2O15247 247 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 ZNF217O75362 1048 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 WASP42768 502 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 CYP2J2P51589 502 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 SNRPFP62306 86 aaKnown RBP14.36□□□□□ -0.11
SS18-222ENST00000582792 FAM193AP78312 1265 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 RING1Q06587 406 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 HNRNPDQ14103 355 aaKnown RBP14.36□□□□□ -0.11
SS18-222ENST00000582792 E2F4Q16254 413 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 FOXD4L6Q3SYB3 417 aaPredicted RBP14.36□□□□□ -0.11
SS18-222ENST00000582792 GRAMD4Q6IC98 578 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 LRSAM1Q6UWE0 723 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 FOXD4L3Q6VB84 417 aaPredicted RBP14.36□□□□□ -0.11
SS18-222ENST00000582792 PAQR9Q6ZVX9 377 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 SLC41A1Q8IVJ1 513 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 MED10Q9BTT4 135 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 DNAAF2Q9NVR5 837 aaKnown RBP14.36□□□□□ -0.11
SS18-222ENST00000582792 GMIPQ9P107 970 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 LHX6Q9UPM6 363 aa14.36□□□□□ -0.11
SS18-222ENST00000582792 A0A1W2PQD8 194 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 ZBTB24O43167 697 aaPredicted RBP14.35□□□□□ -0.11
SS18-222ENST00000582792 SYPP08247 313 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 IRF1P10914 325 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 CD59P13987 128 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 NDUFV2P19404 249 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 CDH8P55286 799 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 ASIC1P78348 528 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 AMPD3Q01432 767 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 ZNF423Q2M1K9 1284 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 FAM26FQ5R3K3 315 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 EGFLAMQ63HQ2 1017 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 SDE2Q6IQ49 451 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 CNNM4Q6P4Q7 775 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 HTR3DQ70Z44 454 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 RAB44Q7Z6P3 723 aaPredicted RBP14.35□□□□□ -0.11
SS18-222ENST00000582792 CHCHD4Q8N4Q1 142 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 OR2I1PQ8NGU4 316 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 IPO4Q8TEX9 1081 aaKnown RBP14.35□□□□□ -0.11
SS18-222ENST00000582792 SMARCD1Q96GM5 515 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 TNIP3Q96KP6 325 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 HSPA12BQ96MM6 686 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 ACOX2Q99424 681 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 NACA2Q9H009 215 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 DNAJC17Q9NVM6 304 aaKnown RBP14.35□□□□□ -0.11
SS18-222ENST00000582792 PCDHA7Q9UN72 937 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 LAMA5O15230 3695 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 UBE4BO95155 1302 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 LOC400499M0QZD8 3231 aa14.35□□□□□ -0.11
SS18-222ENST00000582792 FASNP49327 2511 aaKnown RBP14.35□□□□□ -0.11
SS18-222ENST00000582792 CACNG3O60359 315 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 GREM1O60565 184 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 TLR5O60602 858 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 PHACTR2O75167 634 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 AP1G2O75843 785 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 PGFP49763 221 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 SLC14A1Q13336 389 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 ACAP1Q15027 740 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 NELFCDQ8IXH7 590 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 CHPFQ8IZ52 775 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 TRIML1Q8N9V2 468 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 ZMIZ2Q8NF64 920 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 XPO6Q96QU8 1125 aaKnown RBP14.34□□□□□ -0.11
SS18-222ENST00000582792 GABRG3Q99928 467 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 BBS2Q9BXC9 721 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 KRT82Q9NSB4 513 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 MARK1Q9P0L2 795 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 CYP8B1Q9UNU6 501 aa14.34□□□□□ -0.11
SS18-222ENST00000582792 PRRT4C9JH25 899 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 NEDD8-MDP1E9PL57 170 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 TAF4O00268 1085 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 GJB3O75712 270 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 CAPNS1P04632 268 aa14.33□□□□□ -0.12
SS18-222ENST00000582792 TYRP14679 529 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms