RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMEM161AQ9NX61 479 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 TJP2Q9UDY2 1190 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 ANAPC5Q9UJX4 755 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 HPCAL4Q9UM19 191 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 NR2E1Q9Y466 385 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 PCDHB12Q9Y5F1 795 aa9.7□□□□□ -0.86
SS18-220ENST00000582092 PDCD11Q14690 1871 aaKnown RBP9.7□□□□□ -0.86
SS18-220ENST00000582092 hCG_1818297A0A087WSY0 165 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 TCRBV7S2A1N4TA0A589 114 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ZSCAN5CA6NGD5 496 aaPredicted RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 C9IYK1 514 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 C5orf67F2Z3F1 127 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 SGK1O00141 431 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 CLDN5O00501 218 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 DLL1O00548 723 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 DPYSL4O14531 572 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 PAPSS1O43252 624 aaPredicted RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 LRCH4O75427 683 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 KRT14P02533 472 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ALDH2P05091 517 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 MYBL2P10244 700 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 KRT10P13645 584 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ZFXP17010 805 aaPredicted RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 TYMPP19971 482 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 OAS2P29728 719 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 PTGIRP43119 386 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 PTPN9P43378 593 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 SULT1E1P49888 294 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 TKTL1P51854 596 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 YWHAZP63104 245 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 DYNLT1P63172 113 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 FAM189BP81408 668 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 YWHAHQ04917 246 aaPredicted RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 ZNF252P-AS1Q0IIN9 211 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ADIGQ0VDE8 80 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 BYSLQ13895 437 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 TJAP1Q5JTD0 557 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 KCNT1Q5JUK3 1230 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 DUPD1Q68J44 220 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 OLFML1Q6UWY5 402 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 SLC26A9Q7LBE3 791 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ARCQ7LC44 396 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 RTN4RL1Q86UN2 441 aaPredicted RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 PIGZQ86VD9 579 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 DDX42Q86XP3 938 aaKnown RBP eCLIP9.69□□□□□ -0.86
SS18-220ENST00000582092 GSTCDQ8NEC7 633 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 HASPINQ8TF76 798 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 ATG4AQ8WYN0 398 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 KCTD13Q8WZ19 329 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 RAPGEF5Q92565 580 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 HLA-CQ95604 372 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 PKNOX2Q96KN3 472 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 SUSD3Q96L08 255 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 CFAP57Q96MR6 1250 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 KIAA1671Q9BY89 1806 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 MRPL9Q9BYD2 267 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 UBXN6Q9BZV1 441 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 CACNG4Q9UBN1 327 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 PCDHB8Q9UN66 801 aa9.69□□□□□ -0.86
SS18-220ENST00000582092 DRG1Q9Y295 367 aaKnown RBP9.69□□□□□ -0.86
SS18-220ENST00000582092 EPOPA6NHQ4 379 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 TBKBP1A7MCY6 615 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 GOLGA8KD6RF30 607 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 I3L4J1 428 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 TULP2O00295 520 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 MCF2LO15068 1137 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 HCRTO43612 131 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CST8O60676 142 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 LPXNO60711 386 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 SASH3O75995 380 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CYP11A1P05108 521 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 NOS2P35228 1153 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 ARL4AP40617 200 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 MATKP42679 507 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CDKN2BP42772 138 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 BRCC3P46736 316 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 SLC25A11Q02978 314 aaKnown RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 C15orf59Q2T9L4 293 aaPredicted RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 ARL13BQ3SXY8 428 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CCDC14Q49A88 953 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 DCAF6Q58WW2 860 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 ERMARDQ5T6L9 678 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 PCGF5Q86SE9 256 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CROCCP2Q86T23 111 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 ZNF598Q86UK7 904 aaKnown RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 FUKQ8N0W3 1084 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 MREGQ8N565 214 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 CMASQ8NFW8 434 aaPredicted RBP9.68□□□□□ -0.86
SS18-220ENST00000582092 TEKT4Q8WW24 435 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 LINC01599Q8WXQ3 324 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 P3H4Q92791 437 aa9.68□□□□□ -0.86
SS18-220ENST00000582092 SLCO2A1Q92959 643 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms