RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 METTL12A8MUP2 240 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 KCNJ18B7U540 433 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 KRT18P05783 430 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 IRF1P10914 325 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 GRK6P43250 576 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 CSNK1EP49674 416 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 CLDN6P56747 220 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 ANAPC15P60006 121 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 RBP5P82980 135 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 FUT11Q495W5 492 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 SAAL1Q96ER3 474 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 XPO6Q96QU8 1125 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 ITM2CQ9NQX7 267 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 SLCO1B1Q9Y6L6 691 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 MYH10P35580 1976 aa13.36□□□□□ -0.27
CSNK1D-218ENST00000581655 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 VWA3AA6NCI4 1184 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 GFRA2O00451 464 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CACNG3O60359 315 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 TYRP14679 529 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 TPMTP51580 245 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 POSTNQ15063 836 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 C6orf118Q5T5N4 469 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 DPH6Q7L8W6 267 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 HS2ST1Q7LGA3 356 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 ENGASEQ8NFI3 743 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 C1orf216Q8TAB5 229 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 MYCBPAPQ8TBZ2 947 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 BBS2Q9BXC9 721 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CLMPQ9H6B4 373 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CCSER2Q9H7U1 834 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 TMEM30AQ9NV96 361 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 RBAKQ9NYW8 714 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 DNMT3LQ9UJW3 386 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 SNX11Q9Y5W9 270 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 STON1Q9Y6Q2 735 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 MYLKQ15746 1914 aa13.35□□□□□ -0.27
CSNK1D-218ENST00000581655 CAPN8A6NHC0 703 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 PYCARD-AS1I3L0S3 204 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 KCNK3O14649 394 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 TMEM191BP0C7N4 346 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 JUPP14923 745 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 YWHAQP27348 245 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 NEK4P51957 841 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 MCM6Q14566 821 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 STARD3Q14849 445 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 HECTD3Q5T447 861 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 TPGS1Q6ZTW0 290 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 LIMS2Q7Z4I7 341 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 PDZD8Q8NEN9 1154 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 SNX19Q92543 992 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 BAP1Q92560 729 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 ST6GALNAC4Q9H4F1 302 aa13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-218ENST00000581655 WARSP23381 471 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 OXTRP30559 389 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 HNF1BP35680 557 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 DGKGP49619 791 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 CCT8P50990 548 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 AFF3P51826 1226 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 TAF1BQ53T94 588 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 NUP93Q8N1F7 819 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 HPDLQ96IR7 371 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 ZNF518BQ9C0D4 1074 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 PDE11AQ9HCR9 933 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 FTSJ1Q9UET6 329 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 NME7Q9Y5B8 376 aa13.33□□□□□ -0.28
CSNK1D-218ENST00000581655 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 H0Y8X5 98 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 CLDN5O00501 218 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 PCDHGA12O60330 932 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 RTN3O95197 1032 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 CISD3P0C7P0 127 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 CXADRP78310 365 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 IL9RQ01113 521 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms