RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FGL2Q14314 439 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF267Q14586 743 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 ZDHHC24Q6UX98 284 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF783Q6ZMS7 281 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 GRAMD1CQ8IYS0 662 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 SPARTQ8N0X7 666 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 C12orf76Q8N812 135 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 HIC2Q96JB3 615 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 FAM84BQ96KN1 310 aaPredicted RBP4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 RHOBTB2Q9BYZ6 727 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 MRPL44Q9H9J2 332 aaKnown RBP4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 GABBR1Q9UBS5 961 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 ASAP1Q9ULH1 1129 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 USP22Q9UPT9 525 aa4.19□□□□□ -1.74
SMCHD1-206ENST00000581631 AGPSO00116 658 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 RRHO14718 337 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 AKAP10O43572 662 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 NGFRP08138 427 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 VCAM1P19320 739 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 TACR3P29371 465 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 RAB27AP51159 221 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 STIM1Q13586 685 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 INPP5JQ15735 1006 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 IFIT1BQ5T764 474 aaKnown RBP4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 CHPFQ8IZ52 775 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 ASB5Q8WWX0 329 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 JPH3Q8WXH2 748 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 SLC25A28Q96A46 364 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 C1GALT1C1Q96EU7 318 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 LRGUKQ96M69 825 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 HS6ST2Q96MM7 605 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 MAP3K14Q99558 947 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 TM2D2Q9BX73 214 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 RTFDC1Q9BY42 306 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 CNNM1Q9NRU3 951 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF180Q9UJW8 692 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 FZD4Q9ULV1 537 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 SHROOM4Q9ULL8 1493 aa4.18□□□□□ -1.74
SMCHD1-206ENST00000581631 A0A0G2JK05 382 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 SRGAP2O75044 1071 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 OFD1O75665 1012 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 HOXB2P14652 356 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 TNFRSF8P28908 595 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 CPA2P48052 419 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 GPC5P78333 572 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 FHL3Q13643 280 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 ODF3L2Q3SX64 289 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF793Q6ZN11 406 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 KCTD20Q7Z5Y7 419 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 RFX6Q8HWS3 928 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 TPH2Q8IWU9 490 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 DIS3LQ8TF46 1054 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 MSI2Q96DH6 328 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 ZBTB45Q96K62 511 aaPredicted RBP4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 NLRP4Q96MN2 994 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 NT5C1BQ96P26 610 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 AGO4Q9HCK5 861 aaKnown RBP4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 SELENONQ9NZV5 590 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 RIMKLBQ9ULI2 386 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 CKAP5Q14008 2032 aa4.17□□□□□ -1.74
SMCHD1-206ENST00000581631 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 A8MVJ9 347 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 FYB1O15117 783 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 SPTLC2O15270 562 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 INPPL1O15357 1258 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 CTIFO43310 598 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 AP1G1O43747 822 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 PLAUP00749 431 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 TGFB3P10600 412 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 PRKAR1BP31321 381 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ARRB2P32121 409 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 SLC13A2Q13183 592 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ODR4Q5SWX8 454 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 CC2D1BQ5T0F9 858 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ZNF324BQ6AW86 544 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 COL23A1Q86Y22 540 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 RAVER1Q8IY67 606 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 PNPLA1Q8N8W4 532 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 OR6B3Q8NGW1 331 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 OR56A3Q8NH54 315 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 TRMT61AQ96FX7 289 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 P2RY11Q96G91 374 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 TMEM204Q9BSN7 226 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ZMAT3Q9HA38 289 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ATP6V0A4Q9HBG4 840 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 ZIM2Q9NZV7 527 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 PNMA8BQ9ULN7 279 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 PCDHA12Q9UN75 941 aa4.16□□□□□ -1.74
SMCHD1-206ENST00000581631 E2F8A0AVK6 867 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 EXOC5O00471 708 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 CCP110O43303 1012 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 MBPP02686 304 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 EN2P19622 333 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 PGGT1BP53609 377 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 B3GNT9Q6UX72 402 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 TFAP2DQ7Z6R9 452 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 MICU3Q86XE3 530 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 METTL25Q8N6Q8 603 aa4.15□□□□□ -1.75
SMCHD1-206ENST00000581631 BCAS4Q8TDM0 211 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms