RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 PDZD4Q76G19 769 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TMEM150AQ86TG1 271 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TADA2BQ86TJ2 420 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 KIAA1958Q8N8K9 716 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 STKLD1Q8NE28 680 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 GPR152Q8TDT2 470 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 FNIP1Q8TF40 1166 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 GOLGA1Q92805 767 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 CALR3Q96L12 384 aaKnown RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 CORO1BQ9BR76 489 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 C11orf70Q9BRQ4 267 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 PIDD1Q9HB75 910 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF334Q9HCZ1 680 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 ABCC13Q9NSE7 274 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 OLA1Q9NTK5 396 aaKnown RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 PARVAQ9NVD7 372 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TAS2R14Q9NYV8 317 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 LCMT1Q9UIC8 334 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 NUP210Q8TEM1 1887 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 SIGLEC16A6NMB1 481 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 BTNL10A8MVZ5 291 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF263O14978 683 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 OAS1P00973 400 aaKnown RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 LTFP02788 710 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 H2AFZP0C0S5 128 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 USP17L7P0C7H9 530 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 LCP1P13796 627 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 GABRR2P28476 465 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 CDR1P51861 262 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 YWHAZP63104 245 aaKnown RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 NNTQ13423 1086 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 LEXMQ3ZCV2 418 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 PPP1R15BQ5SWA1 713 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MSANTD2Q6P1R3 559 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 RAD9BQ6WBX8 426 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF662Q6ZS27 426 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 FAM183BPQ6ZVS7 135 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 H2AFVQ71UI9 128 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 GRASPQ7Z6J2 395 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 SCD5Q86SK9 330 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 SCUBE3Q8IX30 993 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 C12orf76Q8N812 135 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MAFAQ8NHW3 353 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 CTNNBL1Q8WYA6 563 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MRPS31Q92665 395 aaKnown RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 SLC2A13Q96QE2 648 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 POPDC2Q9HBU9 364 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 SPTLC3Q9NUV7 552 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 GDE1Q9NZC3 331 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 GMIPQ9P107 970 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 UVRAGQ9P2Y5 699 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 TJP2Q9UDY2 1190 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 TMEM59LQ9UK28 342 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 MAGED2Q9UNF1 606 aaPredicted RBP10.9□□□□□ -0.66
CCDC47-203ENST00000580986 FAM50BQ9Y247 325 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
CCDC47-203ENST00000580986 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 A0A0A6YYK5 440 aaPredicted RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 YJEFN3A6XGL0 299 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 E7ENQ6 273 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 MOSPD3O75425 235 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 DAB1O75553 588 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 MTA2O94776 668 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 CYP1A2P05177 515 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 PTMAP06454 111 aaKnown RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 RALAP11233 206 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 TCF3P15923 654 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 RRM1P23921 792 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 NOS2P35228 1153 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 CCR2P41597 374 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 GALCP54803 685 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 HADHBP55084 474 aaKnown RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 GPC5P78333 572 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 CBX2Q14781 532 aaPredicted RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 ARHGAP15Q53QZ3 475 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 HECTD3Q5T447 861 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 FAM102AQ5T9C2 384 aaPredicted RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 BSPRYQ5W0U4 402 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 OR6B2Q6IFH4 312 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 DNAJC24Q6P3W2 148 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 RHOT2Q8IXI1 618 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 SHKBP1Q8TBC3 707 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 NT5C3BQ969T7 300 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 ZNF653Q96CK0 615 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 PGAP3Q96FM1 320 aaPredicted RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 TASP1Q9H6P5 420 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 HCFC1R1Q9NWW0 138 aa10.89□□□□□ -0.67
CCDC47-203ENST00000580986 MRPS23Q9Y3D9 190 aaKnown RBP10.89□□□□□ -0.67
CCDC47-203ENST00000580986 PRUNE2Q8WUY3 3088 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
CCDC47-203ENST00000580986 A0A1W2PQH9 124 aa10.88□□□□□ -0.67
CCDC47-203ENST00000580986 A0A1W2PRU2 124 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms