RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PIGZQ86VD9 579 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 FAM114A1Q8IWE2 563 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 ZNF276Q8N554 614 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 DCLK3Q9C098 648 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 ARHGEF4Q9NR80 690 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 SPHK2Q9NRA0 654 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 OLA1Q9NTK5 396 aaKnown RBP21.17■□□□□ 0.98
SMG8-204ENST00000580498 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMG8-204ENST00000580498 WDR35Q9P2L0 1181 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 K7ESF4 209 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 SCAMP3O14828 347 aaKnown RBP21.16■□□□□ 0.98
SMG8-204ENST00000580498 APBB3O95704 486 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 BMP6P22004 513 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 GRIA2P42262 883 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 TKTL1P51854 596 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 MRPS21P82921 87 aaKnown RBP21.16■□□□□ 0.98
SMG8-204ENST00000580498 GCNT1Q02742 428 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 LY6G5CQ5SRR4 150 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 HTR3DQ70Z44 454 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 TRMT11Q7Z4G4 463 aaKnown RBP21.16■□□□□ 0.98
SMG8-204ENST00000580498 TRIM59Q8IWR1 403 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 GOLGA1Q92805 767 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 ZFRQ96KR1 1074 aaKnown RBP21.16■□□□□ 0.98
SMG8-204ENST00000580498 DEC1Q9P2X7 70 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 RASAL2Q9UJF2 1139 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 USP3Q9Y6I4 520 aa21.16■□□□□ 0.98
SMG8-204ENST00000580498 GOLGA6L22H0YM25 854 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 ALDH1A2O94788 518 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 ZBED1O96006 694 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 OPRD1P41143 372 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 RHBDF2Q6PJF5 856 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 ENOSF1Q7L5Y1 443 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 MIB1Q86YT6 1006 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 BBS7Q8IWZ6 715 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 EHBP1Q8NDI1 1231 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 RNF139Q8WU17 664 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 GBP4Q96PP9 640 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 KLF16Q9BXK1 252 aaPredicted RBP21.15■□□□□ 0.98
SMG8-204ENST00000580498 FBRSL1Q9HCM7 1045 aaKnown RBP21.15■□□□□ 0.98
SMG8-204ENST00000580498 ATG2BQ96BY7 2078 aa21.15■□□□□ 0.98
SMG8-204ENST00000580498 TBC1D3BA6NDS4 549 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 ZBTB24O43167 697 aaPredicted RBP21.14■□□□□ 0.97
SMG8-204ENST00000580498 HOXC11O43248 304 aaPredicted RBP21.14■□□□□ 0.97
SMG8-204ENST00000580498 KAT7O95251 611 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 SDHBP21912 280 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 TNFRSF4P43489 277 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 SEC13P55735 322 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 YWHAGP61981 247 aaKnown RBP eCLIP21.14■□□□□ 0.97
SMG8-204ENST00000580498 DMC1Q14565 340 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 KIAA2013Q8IYS2 634 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 TSTD1Q8NFU3 115 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 NUP62CLQ9H1M0 184 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 CLSTN2Q9H4D0 955 aa21.14■□□□□ 0.97
SMG8-204ENST00000580498 AXIN1O15169 862 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 MED7O43513 233 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 FOXD2O60548 495 aaPredicted RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 RPP40O75818 363 aaKnown RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 TBX18O95935 607 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 KRT5P13647 590 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 PRKCSHP14314 528 aaPredicted RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 CHKAP35790 457 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 MTIF2P46199 727 aaKnown RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 KDSRQ06136 332 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 PDE4CQ08493 712 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 EFEMP1Q12805 493 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 E2F5Q15329 346 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 C2orf27AQ580R0 203 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 RAB41Q5JT25 222 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 EOGTQ5NDL2 527 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 C11orf74Q86VG3 221 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 KCNV2Q8TDN2 545 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 USP33Q8TEY7 942 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 CNOT6LQ96LI5 555 aaKnown RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 BBS2Q9BXC9 721 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 INTS2Q9H0H0 1204 aaKnown RBP21.13■□□□□ 0.97
SMG8-204ENST00000580498 NMUR1Q9HB89 426 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 CNGB3Q9NQW8 809 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 MARCH2Q9P0N8 246 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 USP18Q9UMW8 372 aa21.13■□□□□ 0.97
SMG8-204ENST00000580498 M0QYV0 167 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 O00370 1275 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 LRP3O75074 770 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 CYBBP04839 570 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 RETP07949 1114 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 MFAP3P55082 362 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 CNGA2Q16280 664 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 GRAMD4Q6IC98 578 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 LCLAT1Q6UWP7 414 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 RRAGAQ7L523 313 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 CACNA2D4Q7Z3S7 1137 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 TTC30AQ86WT1 665 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 RBBP8NLQ8NC74 664 aaPredicted RBP21.12■□□□□ 0.97
SMG8-204ENST00000580498 GAB3Q8WWW8 586 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 KCTD13Q8WZ19 329 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 HHIPQ96QV1 700 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 POLMQ9NP87 494 aaPredicted RBP21.12■□□□□ 0.97
SMG8-204ENST00000580498 OSER1Q9NX31 292 aa21.12■□□□□ 0.97
SMG8-204ENST00000580498 NEDD8-MDP1E9PL57 170 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 DGKEP52429 567 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 LMNB2Q03252 620 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms