RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 NSUN4Q96CB9 384 aaKnown RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SLC7A6OSQ96CW6 309 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 COG8Q96MW5 612 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PPP1R9BQ96SB3 815 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 GPHA2Q96T91 129 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 MYCBPQ99417 103 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 VRK1Q99986 396 aaPredicted RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 WACQ9BTA9 647 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SEZ6LQ9BYH1 1024 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 MAGEB5Q9BZ81 275 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF768Q9H5H4 540 aaKnown RBP3.46□□□□□ -1.86
KPNB1-208ENST00000580019 MANSC1Q9H8J5 431 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 NOD2Q9HC29 1040 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SEMA4GQ9NTN9 838 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 ABCF3Q9NUQ8 709 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 TMEM160Q9NX00 188 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D29Q9UFV1 150 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 SYNPO2Q9UMS6 1093 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 VWA7Q9Y334 891 aa3.46□□□□□ -1.86
KPNB1-208ENST00000580019 PASKQ96RG2 1323 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ABCA5Q8WWZ7 1642 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TRIM43BA6NCK2 446 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 LRRC14BA6NHZ5 514 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TBCAO75347 108 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TSPAN9O75954 239 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ENDOD1O94919 500 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 SGPL1O95470 568 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 PRLP01236 227 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 MMEP08473 750 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GYS1P13807 737 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ATP6V1B1P15313 513 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 MUTP22033 750 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ABCD1P33897 745 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 HOXD13P35453 343 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CCR5P51681 352 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 RPS16P62249 146 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 AP2B1P63010 937 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 BLOC1S1P78537 153 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ADAM15Q13444 863 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CUL4BQ13620 913 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 EIF4A2Q14240 407 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 MYBPC3Q14896 1274 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 UBE3CQ15386 1083 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TSTQ16762 297 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GRAMD4Q6IC98 578 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 NFRKBQ6P4R8 1299 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 UNQ6494/PRO21346Q6UXR6 183 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF783Q6ZMS7 281 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GALNTL5Q7Z4T8 443 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CEP57L1Q8IYX8 460 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GPR156Q8NFN8 814 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CEP70Q8NHQ1 597 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CALML6Q8TD86 181 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 IPO4Q8TEX9 1081 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ASB15Q8WXK1 588 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 RILPL2Q969X0 211 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TRIM43Q96BQ3 446 aaPredicted RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 FOXRED1Q96CU9 486 aaPredicted RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D31Q96DN5 1066 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CYFIP2Q96F07 1278 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC34Q96HJ3 373 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 CNDP2Q96KP4 475 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 RPL10LQ96L21 214 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 SNX27Q96L92 541 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 FCRL4Q96PJ5 515 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 YME1L1Q96TA2 773 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 PRPF18Q99633 342 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 FOXB1Q99853 325 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GDF15Q99988 308 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 DDX23Q9BUQ8 820 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 AGXT2Q9BYV1 514 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GPR63Q9BZJ6 419 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ARHGAP39Q9C0H5 1083 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 SYNCQ9H7C4 482 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 EIF2B3Q9NR50 452 aaKnown RBP3.45□□□□□ -1.86
KPNB1-208ENST00000580019 STK32BQ9NY57 414 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 RGL1Q9NZL6 768 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 IGSF9Q9P2J2 1179 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF112Q9UJU3 913 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 TBX20Q9UMR3 447 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 PCDHA6Q9UN73 950 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 PCDHB6Q9Y5E3 794 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 PCDHA1Q9Y5I3 950 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 GPRASP1Q5JY77 1395 aa3.45□□□□□ -1.86
KPNB1-208ENST00000580019 SOS1Q07889 1333 aaPredicted RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 FHAD1B1AJZ9 1412 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 RUSC2Q8N2Y8 1516 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 SETD1AO15047 1707 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC88BA6NC98 1476 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PRAMEF22A3QJZ6 481 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 GTPBP1O00178 669 aaKnown RBP3.44□□□□□ -1.86
KPNB1-208ENST00000580019 BTN3A1O00481 513 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 AP3D1O14617 1153 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HMMRO75330 724 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 PTP4A3O75365 173 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 ESRRBO95718 433 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 HSPA4LO95757 839 aa3.44□□□□□ -1.86
KPNB1-208ENST00000580019 NDST3O95803 873 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms